RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 USP27XA6NNY8 438 aa26.54■■□□□ 1.84
NME3-208ENST00000565379 NPC1O15118 1278 aa26.54■■□□□ 1.84
NME3-208ENST00000565379 DDX3YO15523 660 aaKnown RBP26.54■■□□□ 1.84
NME3-208ENST00000565379 ADAM23O75077 832 aa26.54■■□□□ 1.84
NME3-208ENST00000565379 ASLP04424 464 aa26.54■■□□□ 1.84
NME3-208ENST00000565379 ATP5BP06576 529 aaKnown RBP26.54■■□□□ 1.84
NME3-208ENST00000565379 AMPD1P23109 780 aa26.54■■□□□ 1.84
NME3-208ENST00000565379 CD70P32970 193 aa26.54■■□□□ 1.84
NME3-208ENST00000565379 CDKN2BP42772 138 aa26.54■■□□□ 1.84
NME3-208ENST00000565379 DGKEP52429 567 aa26.54■■□□□ 1.84
NME3-208ENST00000565379 TFDP2Q14188 446 aa26.54■■□□□ 1.84
NME3-208ENST00000565379 GEN1Q17RS7 908 aa26.54■■□□□ 1.84
NME3-208ENST00000565379 PLEKHG6Q3KR16 790 aa26.54■■□□□ 1.84
NME3-208ENST00000565379 ZNF569Q5MCW4 686 aa26.54■■□□□ 1.84
NME3-208ENST00000565379 RNF219Q5W0B1 726 aaPredicted RBP26.54■■□□□ 1.84
NME3-208ENST00000565379 SPOCD1Q6ZMY3 1216 aa26.54■■□□□ 1.84
NME3-208ENST00000565379 NETO1Q8TDF5 533 aa26.54■■□□□ 1.84
NME3-208ENST00000565379 TTC17Q96AE7 1141 aa26.54■■□□□ 1.84
NME3-208ENST00000565379 FEM1AQ9BSK4 669 aa26.54■■□□□ 1.84
NME3-208ENST00000565379 C2orf49Q9BVC5 232 aaPredicted RBP26.54■■□□□ 1.84
NME3-208ENST00000565379 ARRDC1-AS1Q9H2J1 176 aa26.54■■□□□ 1.84
NME3-208ENST00000565379 DNAI1Q9UI46 699 aa26.54■■□□□ 1.84
NME3-208ENST00000565379 TPRP12270 2363 aaKnown RBP26.54■■□□□ 1.84
NME3-208ENST00000565379 FOXD2O60548 495 aaPredicted RBP26.53■■□□□ 1.84
NME3-208ENST00000565379 POLR2EP19388 210 aaKnown RBP26.53■■□□□ 1.84
NME3-208ENST00000565379 PTPN7P35236 360 aa26.53■■□□□ 1.84
NME3-208ENST00000565379 CSKP41240 450 aa26.53■■□□□ 1.84
NME3-208ENST00000565379 MARCKSL1P49006 195 aa26.53■■□□□ 1.84
NME3-208ENST00000565379 MMRN1Q13201 1228 aa26.53■■□□□ 1.84
NME3-208ENST00000565379 POLD3Q15054 466 aaPredicted RBP26.53■■□□□ 1.84
NME3-208ENST00000565379 CRY1Q16526 586 aa26.53■■□□□ 1.84
NME3-208ENST00000565379 PITRM1Q5JRX3 1037 aa26.53■■□□□ 1.84
NME3-208ENST00000565379 MFSD7Q6UXD7 560 aa26.53■■□□□ 1.84
NME3-208ENST00000565379 CCDC50Q8IVM0 306 aa26.53■■□□□ 1.84
NME3-208ENST00000565379 MDGA1Q8NFP4 955 aa26.53■■□□□ 1.84
NME3-208ENST00000565379 PCDH19Q8TAB3 1148 aa26.53■■□□□ 1.84
NME3-208ENST00000565379 ALG3Q92685 438 aa26.53■■□□□ 1.84
NME3-208ENST00000565379 ERLEC1Q96DZ1 483 aa26.53■■□□□ 1.84
NME3-208ENST00000565379 ELOVL2Q9NXB9 296 aa26.53■■□□□ 1.84
NME3-208ENST00000565379 EBF1Q9UH73 591 aa26.53■■□□□ 1.84
NME3-208ENST00000565379 VPS28Q9UK41 221 aa26.53■■□□□ 1.84
NME3-208ENST00000565379 PACSIN2Q9UNF0 486 aaPredicted RBP26.53■■□□□ 1.84
NME3-208ENST00000565379 OR51B4Q9Y5P0 310 aa26.53■■□□□ 1.84
NME3-208ENST00000565379 SLC30A4O14863 429 aa26.52■■□□□ 1.84
NME3-208ENST00000565379 GDF9O60383 454 aa26.52■■□□□ 1.84
NME3-208ENST00000565379 MRPS21P82921 87 aaKnown RBP26.52■■□□□ 1.84
NME3-208ENST00000565379 PAFAH1B3Q15102 231 aaKnown RBP26.52■■□□□ 1.84
NME3-208ENST00000565379 PLK5Q496M5 336 aa26.52■■□□□ 1.84
NME3-208ENST00000565379 HSF5Q4G112 596 aaPredicted RBP26.52■■□□□ 1.84
NME3-208ENST00000565379 MBLAC2Q68D91 279 aa26.52■■□□□ 1.84
NME3-208ENST00000565379 TRMT11Q7Z4G4 463 aaKnown RBP26.52■■□□□ 1.84
NME3-208ENST00000565379 ADIPOR2Q86V24 386 aa26.52■■□□□ 1.84
NME3-208ENST00000565379 LRRC49Q8IUZ0 686 aa26.52■■□□□ 1.84
NME3-208ENST00000565379 DCAF4L2Q8NA75 395 aa26.52■■□□□ 1.84
NME3-208ENST00000565379 ALG14Q96F25 216 aa26.52■■□□□ 1.84
NME3-208ENST00000565379 DUSP15Q9H1R2 295 aaPredicted RBP26.52■■□□□ 1.84
NME3-208ENST00000565379 NDFIP2Q9NV92 336 aa26.52■■□□□ 1.84
NME3-208ENST00000565379 HPCAL4Q9UM19 191 aa26.52■■□□□ 1.84
NME3-208ENST00000565379 RAD54BQ9Y620 910 aa26.52■■□□□ 1.84
NME3-208ENST00000565379 ARHGAP42A6NI28 874 aa26.51■■□□□ 1.83
NME3-208ENST00000565379 BCKDHBP21953 392 aa26.51■■□□□ 1.83
NME3-208ENST00000565379 MZF1P28698 734 aaPredicted RBP26.51■■□□□ 1.83
NME3-208ENST00000565379 WASP42768 502 aa26.51■■□□□ 1.83
NME3-208ENST00000565379 SF3A2Q15428 464 aaKnown RBP26.51■■□□□ 1.83
NME3-208ENST00000565379 FUT11Q495W5 492 aa26.51■■□□□ 1.83
NME3-208ENST00000565379 AFMIDQ63HM1 303 aa26.51■■□□□ 1.83
NME3-208ENST00000565379 SLC9A4Q6AI14 798 aa26.51■■□□□ 1.83
NME3-208ENST00000565379 PRR23CQ6ZRP0 262 aa26.51■■□□□ 1.83
NME3-208ENST00000565379 RASSF3Q86WH2 238 aa26.51■■□□□ 1.83
NME3-208ENST00000565379 RFX6Q8HWS3 928 aa26.51■■□□□ 1.83
NME3-208ENST00000565379 ARHGEF2Q92974 986 aaKnown RBP26.51■■□□□ 1.83
NME3-208ENST00000565379 CARD9Q9H257 536 aa26.51■■□□□ 1.83
NME3-208ENST00000565379 LRRC19Q9H756 370 aa26.51■■□□□ 1.83
NME3-208ENST00000565379 INTS6Q9UL03 887 aaKnown RBP26.51■■□□□ 1.83
NME3-208ENST00000565379 hCG_1818297A0A087WSY0 165 aa26.5■■□□□ 1.83
NME3-208ENST00000565379 LOC105378220A0A1B0GUY1 285 aaPredicted RBP26.5■■□□□ 1.83
NME3-208ENST00000565379 PRRT4C9JH25 899 aa26.5■■□□□ 1.83
NME3-208ENST00000565379 APOL1O14791 398 aa26.5■■□□□ 1.83
NME3-208ENST00000565379 EPN2O95208 641 aa26.5■■□□□ 1.83
NME3-208ENST00000565379 VASPP50552 380 aaPredicted RBP26.5■■□□□ 1.83
NME3-208ENST00000565379 BZW1Q7L1Q6 419 aaKnown RBP26.5■■□□□ 1.83
NME3-208ENST00000565379 SLC35F6Q8N357 371 aa26.5■■□□□ 1.83
NME3-208ENST00000565379 PQLC3Q8N755 202 aa26.5■■□□□ 1.83
NME3-208ENST00000565379 KDM1BQ8NB78 822 aa26.5■■□□□ 1.83
NME3-208ENST00000565379 OR52K2Q8NGK3 314 aa26.5■■□□□ 1.83
NME3-208ENST00000565379 ACOX2Q99424 681 aa26.5■■□□□ 1.83
NME3-208ENST00000565379 TLR10Q9BXR5 811 aa26.5■■□□□ 1.83
NME3-208ENST00000565379 ACE2Q9BYF1 805 aaPredicted RBP26.5■■□□□ 1.83
NME3-208ENST00000565379 CIPCQ9C0C6 399 aa26.5■■□□□ 1.83
NME3-208ENST00000565379 KLC2Q9H0B6 622 aa26.5■■□□□ 1.83
NME3-208ENST00000565379 ATP13A1Q9HD20 1204 aa26.5■■□□□ 1.83
NME3-208ENST00000565379 RXFP3Q9NSD7 469 aa26.5■■□□□ 1.83
NME3-208ENST00000565379 PLA2G4CQ9UP65 541 aa26.5■■□□□ 1.83
NME3-208ENST00000565379 A0A0D9SEW6 157 aa26.49■■□□□ 1.83
NME3-208ENST00000565379 ZSCAN5CA6NGD5 496 aaPredicted RBP26.49■■□□□ 1.83
NME3-208ENST00000565379 RASA4BC9J798 803 aa26.49■■□□□ 1.83
NME3-208ENST00000565379 RASA4O43374 803 aa26.49■■□□□ 1.83
NME3-208ENST00000565379 SRPRAP08240 638 aaKnown RBP26.49■■□□□ 1.83
NME3-208ENST00000565379 DLDP09622 509 aaKnown RBP26.49■■□□□ 1.83
NME3-208ENST00000565379 GEMIN4P57678 1058 aaKnown RBP26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms