RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 FANCAO15360 1455 aa4.65□□□□□ -1.66
CHD9-212ENST00000564641 STMND1H3BQB6 276 aa4.65□□□□□ -1.67
CHD9-212ENST00000564641 ASAP2O43150 1006 aa4.65□□□□□ -1.67
CHD9-212ENST00000564641 DNPH1O43598 174 aa4.65□□□□□ -1.67
CHD9-212ENST00000564641 FCGR1AP12314 374 aa4.65□□□□□ -1.67
CHD9-212ENST00000564641 FAM3BP58499 235 aaPredicted RBP4.65□□□□□ -1.67
CHD9-212ENST00000564641 RNASELQ05823 741 aaKnown RBP4.65□□□□□ -1.67
CHD9-212ENST00000564641 TRAF1Q13077 416 aa4.65□□□□□ -1.67
CHD9-212ENST00000564641 ATPAF1Q5TC12 328 aaPredicted RBP4.65□□□□□ -1.67
CHD9-212ENST00000564641 FAM171A1Q5VUB5 890 aa4.65□□□□□ -1.67
CHD9-212ENST00000564641 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.65□□□□□ -1.67
CHD9-212ENST00000564641 SLC30A9Q6PML9 568 aa4.65□□□□□ -1.67
CHD9-212ENST00000564641 LMO3Q8TAP4 145 aa4.65□□□□□ -1.67
CHD9-212ENST00000564641 DEPTORQ8TB45 409 aa4.65□□□□□ -1.67
CHD9-212ENST00000564641 TMEM163Q8TC26 289 aa4.65□□□□□ -1.67
CHD9-212ENST00000564641 NR4A3Q92570 626 aa4.65□□□□□ -1.67
CHD9-212ENST00000564641 TNIP3Q96KP6 325 aa4.65□□□□□ -1.67
CHD9-212ENST00000564641 MYD88Q99836 296 aa4.65□□□□□ -1.67
CHD9-212ENST00000564641 ZDHHC7Q9NXF8 308 aa4.65□□□□□ -1.67
CHD9-212ENST00000564641 IGSF9Q9P2J2 1179 aa4.65□□□□□ -1.67
CHD9-212ENST00000564641 EFCAB5A4FU69 1503 aa4.65□□□□□ -1.67
CHD9-212ENST00000564641 RAPGEF6Q8TEU7 1601 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 MAGI2Q86UL8 1455 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 LIASO43766 372 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 LDB3O75112 727 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 CAND2O75155 1236 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 IGKV3-20P01619 116 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 AVPR1AP37288 418 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 RCAN1P53805 252 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 KIF5AQ12840 1032 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 HLFQ16534 295 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 ZACNQ401N2 412 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 C5orf22Q49AR2 442 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 HEPHL1Q6MZM0 1159 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 SPSB3Q6PJ21 355 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 USP43Q70EL4 1123 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 CREB3L2Q70SY1 520 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 ZNF367Q7RTV3 350 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 ZDHHC23Q8IYP9 409 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 LRRC57Q8N9N7 239 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 CMASQ8NFW8 434 aaPredicted RBP4.64□□□□□ -1.67
CHD9-212ENST00000564641 FAM110DQ8TAY7 271 aaPredicted RBP4.64□□□□□ -1.67
CHD9-212ENST00000564641 CLEC4CQ8WTT0 213 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 FAM216AQ8WUB2 273 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 POLDIP3Q9BY77 421 aaKnown RBP4.64□□□□□ -1.67
CHD9-212ENST00000564641 HIPK3Q9H422 1215 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 SLC25A13Q9UJS0 675 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 RAP2CQ9Y3L5 183 aa4.64□□□□□ -1.67
CHD9-212ENST00000564641 FMN1Q68DA7 1419 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 AKNAQ7Z591 1439 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 EVPLQ92817 2033 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 SAMD9Q5K651 1589 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 C17orf102A2RUQ5 167 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 GOLGA6L3A6NEY3 463 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 I6L893 689 aaPredicted RBP4.63□□□□□ -1.67
CHD9-212ENST00000564641 ASNA1O43681 348 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 KIF1CO43896 1103 aaKnown RBP4.63□□□□□ -1.67
CHD9-212ENST00000564641 UNGP13051 313 aaPredicted RBP4.63□□□□□ -1.67
CHD9-212ENST00000564641 GNLYP22749 145 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 RFX5P48382 616 aaPredicted RBP4.63□□□□□ -1.67
CHD9-212ENST00000564641 ZBTB16Q05516 673 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 GFI1BQ5VTD9 330 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 KSR2Q6VAB6 950 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 Q6ZSV7 163 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 CCDC146Q8IYE0 955 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 CLIP4Q8N3C7 705 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 OR14A16Q8NHC5 309 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 FAM71BQ8TC56 605 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 SLC35F5Q8WV83 523 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 C18orf8Q96DM3 657 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 RTP4Q96DX8 246 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 TMEM41AQ96HV5 264 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 DUX5Q96PT3 197 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 FRG2BQ96QU4 278 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 MECRQ9BV79 373 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 ZNF556Q9HAH1 456 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 PDE11AQ9HCR9 933 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 PLSCR4Q9NRQ2 329 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 PHTF1Q9UMS5 762 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 SRPRBQ9Y5M8 271 aaKnown RBP4.63□□□□□ -1.67
CHD9-212ENST00000564641 NOTCH4Q99466 2003 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 CLIP1P30622 1438 aa4.63□□□□□ -1.67
CHD9-212ENST00000564641 DENND4BO75064 1496 aaPredicted RBP4.62□□□□□ -1.67
CHD9-212ENST00000564641 ATP10BO94823 1461 aa4.62□□□□□ -1.67
CHD9-212ENST00000564641 KIF21BO75037 1637 aa4.62□□□□□ -1.67
CHD9-212ENST00000564641 A0A1B0GUV1 79 aa4.62□□□□□ -1.67
CHD9-212ENST00000564641 TMCC1O94876 653 aa4.62□□□□□ -1.67
CHD9-212ENST00000564641 KRT18P05783 430 aaKnown RBP4.62□□□□□ -1.67
CHD9-212ENST00000564641 MMP3P08254 477 aa4.62□□□□□ -1.67
CHD9-212ENST00000564641 PEPDP12955 493 aa4.62□□□□□ -1.67
CHD9-212ENST00000564641 ENO3P13929 434 aaPredicted RBP4.62□□□□□ -1.67
CHD9-212ENST00000564641 PRKCHP24723 683 aa4.62□□□□□ -1.67
CHD9-212ENST00000564641 GNALP38405 381 aa4.62□□□□□ -1.67
CHD9-212ENST00000564641 TECP42680 631 aa4.62□□□□□ -1.67
CHD9-212ENST00000564641 COMPP49747 757 aaPredicted RBP4.62□□□□□ -1.67
CHD9-212ENST00000564641 ALKBH1Q13686 389 aaKnown RBP4.62□□□□□ -1.67
CHD9-212ENST00000564641 NFRKBQ6P4R8 1299 aa4.62□□□□□ -1.67
CHD9-212ENST00000564641 PALB2Q86YC2 1186 aa4.62□□□□□ -1.67
CHD9-212ENST00000564641 TMEM217Q8N7C4 229 aa4.62□□□□□ -1.67
CHD9-212ENST00000564641 ADAMTS14Q8WXS8 1223 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms