RNA–Protein interactions for RNA: ENST00000563900.5

NSMCE1-206, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-206ENST00000563900 SPON2Q9BUD6 331 aa9.01□□□□□ -0.97
NSMCE1-206ENST00000563900 CEP44Q9C0F1 390 aa9.01□□□□□ -0.97
NSMCE1-206ENST00000563900 DUSP15Q9H1R2 295 aaPredicted RBP9.01□□□□□ -0.97
NSMCE1-206ENST00000563900 PDFQ9HBH1 243 aa9.01□□□□□ -0.97
NSMCE1-206ENST00000563900 ATP13A1Q9HD20 1204 aa9.01□□□□□ -0.97
NSMCE1-206ENST00000563900 LUC7LQ9NQ29 371 aaKnown RBP9.01□□□□□ -0.97
NSMCE1-206ENST00000563900 ITM2CQ9NQX7 267 aa9.01□□□□□ -0.97
NSMCE1-206ENST00000563900 ETNK2Q9NVF9 386 aa9.01□□□□□ -0.97
NSMCE1-206ENST00000563900 DONSONQ9NYP3 566 aa9.01□□□□□ -0.97
NSMCE1-206ENST00000563900 MBD1Q9UIS9 605 aaPredicted RBP9.01□□□□□ -0.97
NSMCE1-206ENST00000563900 SLC25A13Q9UJS0 675 aa9.01□□□□□ -0.97
NSMCE1-206ENST00000563900 SMG5Q9UPR3 1016 aaKnown RBP9.01□□□□□ -0.97
NSMCE1-206ENST00000563900 ACTL7AQ9Y615 435 aa9.01□□□□□ -0.97
NSMCE1-206ENST00000563900 GOLGA6L3A6NEY3 463 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 ZSCAN5CA6NGD5 496 aaPredicted RBP9□□□□□ -0.97
NSMCE1-206ENST00000563900 C3orf70A6NLC5 250 aaPredicted RBP9□□□□□ -0.97
NSMCE1-206ENST00000563900 ZNF487B1APH4 448 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 CBX4O00257 560 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 ALOX15BO15296 676 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 KDELR3O43731 214 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 PRAMEF11O60813 436 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 ZNF217O75362 1048 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 LMNAP02545 664 aaKnown RBP9□□□□□ -0.97
NSMCE1-206ENST00000563900 KRT7P08729 469 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 COMTP21964 271 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 NNMTP40261 264 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 ARL4AP40617 200 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 CDH6P55285 790 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 PDK2Q15119 407 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 USP39Q53GS9 565 aaKnown RBP9□□□□□ -0.97
NSMCE1-206ENST00000563900 PMS2CLQ68D20 193 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 ZNF776Q68DI1 518 aaPredicted RBP9□□□□□ -0.97
NSMCE1-206ENST00000563900 RETSATQ6NUM9 610 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 C11orf63Q6NUN7 778 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 LINGO4Q6UY18 593 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 Q6ZVU0 165 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 C11orf74Q86VG3 221 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 TP53INP2Q8IXH6 220 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 PLPP6Q8IY26 295 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 FRMD1Q8N878 549 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 LRRC57Q8N9N7 239 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 CCDC112Q8NEF3 446 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 OR2A12Q8NGT7 310 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 TPCN2Q8NHX9 752 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 PCDH19Q8TAB3 1148 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 RLN3Q8WXF3 142 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 RAPGEF5Q92565 580 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 PRCCQ92733 491 aaPredicted RBP9□□□□□ -0.97
NSMCE1-206ENST00000563900 ISG20Q96AZ6 181 aaKnown RBP9□□□□□ -0.97
NSMCE1-206ENST00000563900 SIPA1Q96FS4 1042 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 CALR3Q96L12 384 aaKnown RBP9□□□□□ -0.97
NSMCE1-206ENST00000563900 PRDM16Q9HAZ2 1276 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 BCCIPQ9P287 314 aaKnown RBP eCLIP9□□□□□ -0.97
NSMCE1-206ENST00000563900 MFHAS1Q9Y4C4 1052 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 ADGRG1Q9Y653 693 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 ALG6Q9Y672 507 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 DUSP10Q9Y6W6 482 aa9□□□□□ -0.97
NSMCE1-206ENST00000563900 CACNA1EQ15878 2313 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 TNRC6BQ9UPQ9 1833 aaKnown RBP8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 A0A0U1RQJ8 604 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 TMEM110-MUSTN1A8MSY1 372 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 GOLGA6L6A8MZA4 724 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 MCF2LO15068 1137 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 IPO7O95373 1038 aaKnown RBP8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 PEX11BO96011 259 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 CTSLP07711 333 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 AMPD1P23109 780 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 TPMTP51580 245 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 GEMIN4P57678 1058 aaKnown RBP8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 CCZ1BP86790 482 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 CCZ1P86791 482 aaPredicted RBP8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 MMRN1Q13201 1228 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 BYSLQ13895 437 aaKnown RBP8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 SIM2Q14190 667 aaPredicted RBP8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 CST6Q15828 149 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 TAZQ16635 292 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 INO80DQ53TQ3 878 aaPredicted RBP8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 SPDYCQ5MJ68 293 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 NCBP2-AS2Q69YL0 99 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 IL31Q6EBC2 164 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 LAIR1Q6GTX8 287 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 KIAA1324Q6UXG2 1013 aaKnown RBP8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 USP30Q70CQ3 517 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 KBTBD6Q86V97 674 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 LRRC8AQ8IWT6 810 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 STK40Q8N2I9 435 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 FAM160A2Q8N612 972 aaPredicted RBP8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 LZTR1Q8N653 840 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 PCDH20Q8N6Y1 951 aaKnown RBP8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 PQLC3Q8N755 202 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 ATP11CQ8NB49 1132 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 CASKIN2Q8WXE0 1202 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 FAM122AQ96E09 287 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 CELF6Q96J87 481 aaKnown RBP8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 LOXL4Q96JB6 756 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 PDLIM2Q96JY6 352 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 DESI2Q9BSY9 194 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 SLC39A8Q9C0K1 460 aa8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 PABPC3Q9H361 631 aaKnown RBP8.99□□□□□ -0.97
NSMCE1-206ENST00000563900 GOLPH3Q9H4A6 298 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms