RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 CHKBQ9Y259 395 aa19.46■□□□□ 0.71
SMPD3-203ENST00000563226 USH1CQ9Y6N9 552 aa19.46■□□□□ 0.71
SMPD3-203ENST00000563226 CCDC195A0A1B0GUA6 201 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 GOLGA8TH3BQL2 631 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 C2CD2LO14523 706 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 TLR5O60602 858 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 DNAJC8O75937 253 aaPredicted RBP19.45■□□□□ 0.7
SMPD3-203ENST00000563226 IRX4P78413 519 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 SMARCB1Q12824 385 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 PPM1JQ5JR12 505 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 ZNF449Q6P9G9 518 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 STRA8Q7Z7C7 330 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 PCDH10Q9P2E7 1040 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 TXNDC16Q9P2K2 825 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 MTRRQ9UBK8 725 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 ZNF212Q9UDV6 495 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 EMCNQ9ULC0 261 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 MIA3Q5JRA6 1907 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 E2F8A0AVK6 867 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 PSMD3O43242 534 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 PMPCBO75439 489 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 OR1D2P34982 312 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 ADRA1AP35348 466 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 ALDH7A1P49419 539 aaKnown RBP19.45■□□□□ 0.7
SMPD3-203ENST00000563226 NUMBP49757 651 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 NCALDP61601 193 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 RPL10AP62906 217 aaKnown RBP19.45■□□□□ 0.7
SMPD3-203ENST00000563226 BNIP1Q12981 228 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 FRG1Q14331 258 aaKnown RBP19.45■□□□□ 0.7
SMPD3-203ENST00000563226 NADSYN1Q6IA69 706 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 TMCO2Q7Z6W1 182 aaPredicted RBP19.45■□□□□ 0.7
SMPD3-203ENST00000563226 CMC1Q7Z7K0 106 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 LINC00523Q86TU6 105 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 KCNMB4Q86W47 210 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 CNPY4Q8N129 248 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 C2orf15Q8WU43 125 aaKnown RBP19.45■□□□□ 0.7
SMPD3-203ENST00000563226 KLHL5Q96PQ7 755 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 RBBP8Q99708 897 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 MYLK2Q9H1R3 596 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 ATXN3LQ9H3M9 355 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 C20orf96Q9NUD7 363 aaPredicted RBP19.45■□□□□ 0.7
SMPD3-203ENST00000563226 DCTN4Q9UJW0 460 aa19.45■□□□□ 0.7
SMPD3-203ENST00000563226 ANXA9O76027 345 aa19.44■□□□□ 0.7
SMPD3-203ENST00000563226 KCNQ1P51787 676 aa19.44■□□□□ 0.7
SMPD3-203ENST00000563226 NDST2P52849 883 aa19.44■□□□□ 0.7
SMPD3-203ENST00000563226 PDE1BQ01064 536 aa19.44■□□□□ 0.7
SMPD3-203ENST00000563226 POU6F1Q14863 301 aa19.44■□□□□ 0.7
SMPD3-203ENST00000563226 GRTP1Q5TC63 336 aa19.44■□□□□ 0.7
SMPD3-203ENST00000563226 FYB2Q5VWT5 728 aa19.44■□□□□ 0.7
SMPD3-203ENST00000563226 SLC8B1Q6J4K2 584 aa19.44■□□□□ 0.7
SMPD3-203ENST00000563226 KDELC2Q7Z4H8 507 aa19.44■□□□□ 0.7
SMPD3-203ENST00000563226 KIFC1Q9BW19 673 aa19.44■□□□□ 0.7
SMPD3-203ENST00000563226 ECT2Q9H8V3 914 aa19.44■□□□□ 0.7
SMPD3-203ENST00000563226 SIRPGQ9P1W8 387 aa19.44■□□□□ 0.7
SMPD3-203ENST00000563226 FNIP2Q9P278 1114 aa19.44■□□□□ 0.7
SMPD3-203ENST00000563226 MAGEB16A2A368 324 aa19.44■□□□□ 0.7
SMPD3-203ENST00000563226 GSRP00390 522 aa19.44■□□□□ 0.7
SMPD3-203ENST00000563226 GEMP55040 296 aa19.44■□□□□ 0.7
SMPD3-203ENST00000563226 USP41Q3LFD5 358 aa19.44■□□□□ 0.7
SMPD3-203ENST00000563226 RNF168Q8IYW5 571 aaPredicted RBP19.44■□□□□ 0.7
SMPD3-203ENST00000563226 DCLK2Q8N568 766 aa19.44■□□□□ 0.7
SMPD3-203ENST00000563226 ACMSDQ8TDX5 336 aa19.44■□□□□ 0.7
SMPD3-203ENST00000563226 MRGPRX2Q96LB1 330 aa19.44■□□□□ 0.7
SMPD3-203ENST00000563226 RPRD1AQ96P16 312 aaPredicted RBP19.44■□□□□ 0.7
SMPD3-203ENST00000563226 TTLL2Q9BWV7 592 aa19.44■□□□□ 0.7
SMPD3-203ENST00000563226 ZNF395Q9H8N7 513 aaPredicted RBP19.44■□□□□ 0.7
SMPD3-203ENST00000563226 SLC40A1Q9NP59 571 aa19.44■□□□□ 0.7
SMPD3-203ENST00000563226 IARS2Q9NSE4 1012 aaKnown RBP19.44■□□□□ 0.7
SMPD3-203ENST00000563226 NUMBLQ9Y6R0 609 aa19.44■□□□□ 0.7
SMPD3-203ENST00000563226 CHRNA4P43681 627 aa19.43■□□□□ 0.7
SMPD3-203ENST00000563226 LIMK2P53671 638 aa19.43■□□□□ 0.7
SMPD3-203ENST00000563226 MAXP61244 160 aa19.43■□□□□ 0.7
SMPD3-203ENST00000563226 SLC10A7Q0GE19 358 aa19.43■□□□□ 0.7
SMPD3-203ENST00000563226 CCDC15Q0P6D6 951 aa19.43■□□□□ 0.7
SMPD3-203ENST00000563226 BST1Q10588 318 aa19.43■□□□□ 0.7
SMPD3-203ENST00000563226 CHI3L2Q15782 390 aa19.43■□□□□ 0.7
SMPD3-203ENST00000563226 N4BP2L1Q5TBK1 243 aaPredicted RBP19.43■□□□□ 0.7
SMPD3-203ENST00000563226 LRRC49Q8IUZ0 686 aa19.43■□□□□ 0.7
SMPD3-203ENST00000563226 DIS3LQ8TF46 1054 aaKnown RBP19.43■□□□□ 0.7
SMPD3-203ENST00000563226 ATP2A3Q93084 1043 aa19.43■□□□□ 0.7
SMPD3-203ENST00000563226 PSMG2Q969U7 264 aa19.43■□□□□ 0.7
SMPD3-203ENST00000563226 ERP27Q96DN0 273 aa19.43■□□□□ 0.7
SMPD3-203ENST00000563226 IGSF21Q96ID5 467 aa19.43■□□□□ 0.7
SMPD3-203ENST00000563226 UBE2OQ9C0C9 1292 aaKnown RBP19.43■□□□□ 0.7
SMPD3-203ENST00000563226 NT5MQ9NPB1 228 aa19.43■□□□□ 0.7
SMPD3-203ENST00000563226 TMEM51Q9NW97 253 aa19.43■□□□□ 0.7
SMPD3-203ENST00000563226 COMMD8Q9NX08 183 aa19.43■□□□□ 0.7
SMPD3-203ENST00000563226 DRGXA6NNA5 263 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 KLF11O14901 512 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 SEC24AO95486 1093 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 PRKCGP05129 697 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 BPGMP07738 259 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 TROVE2P10155 538 aaKnown RBP eCLIP19.42■□□□□ 0.7
SMPD3-203ENST00000563226 IHHQ14623 411 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 PCSK7Q16549 785 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 ANO4Q32M45 955 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 FSTL4Q6MZW2 842 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 NLRP9Q7RTR0 991 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 NUDCD3Q8IVD9 361 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 GBP7Q8N8V2 638 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms