RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 TCN1P20061 433 aaPredicted RBP14.27□□□□□ -0.12
GTF3C1-203ENST00000562609 KCNA4P22459 653 aa14.27□□□□□ -0.12
GTF3C1-203ENST00000562609 SERPINB5P36952 375 aa14.27□□□□□ -0.12
GTF3C1-203ENST00000562609 EFNA5P52803 228 aa14.27□□□□□ -0.12
GTF3C1-203ENST00000562609 MAMLD1Q13495 774 aa14.27□□□□□ -0.12
GTF3C1-203ENST00000562609 MXD4Q14582 209 aaPredicted RBP14.27□□□□□ -0.12
GTF3C1-203ENST00000562609 PIGGQ5H8A4 983 aa14.27□□□□□ -0.12
GTF3C1-203ENST00000562609 LDLRAD1Q5T700 205 aa14.27□□□□□ -0.12
GTF3C1-203ENST00000562609 LGSNQ5TDP6 509 aa14.27□□□□□ -0.12
GTF3C1-203ENST00000562609 ATF7IP2Q5U623 682 aa14.27□□□□□ -0.12
GTF3C1-203ENST00000562609 ZPBP2Q6X784 338 aa14.27□□□□□ -0.12
GTF3C1-203ENST00000562609 GPRC5AQ8NFJ5 357 aa14.27□□□□□ -0.12
GTF3C1-203ENST00000562609 ZC3H15Q8WU90 426 aaKnown RBP14.27□□□□□ -0.12
GTF3C1-203ENST00000562609 DLG3Q92796 817 aa14.27□□□□□ -0.12
GTF3C1-203ENST00000562609 ATP6V1E2Q96A05 226 aa14.27□□□□□ -0.12
GTF3C1-203ENST00000562609 CPB2Q96IY4 423 aa14.27□□□□□ -0.12
GTF3C1-203ENST00000562609 DOK1Q99704 481 aa14.27□□□□□ -0.12
GTF3C1-203ENST00000562609 SMARCAD1Q9H4L7 1026 aa14.27□□□□□ -0.12
GTF3C1-203ENST00000562609 DNAJC28Q9NX36 388 aa14.27□□□□□ -0.12
GTF3C1-203ENST00000562609 SLC30A1Q9Y6M5 507 aa14.27□□□□□ -0.12
GTF3C1-203ENST00000562609 LRRC37A2A6NM11 1700 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 A0A087WZ62 844 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 CCL15-CCL14A0A0B4J2E2 113 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 IGKV6-21A0A0C4DH24 114 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 GLTPD2A6NH11 291 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 GMNNO75496 209 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 GRM5P41594 1212 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 RAP1GAPP47736 663 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 DPYSQ14117 519 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 RAB39AQ14964 217 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 CCL15Q16663 113 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 FSCBQ5H9T9 825 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 ZNF618Q5T7W0 954 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 MROH9Q5TGP6 573 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 MBLAC2Q68D91 279 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 TTC33Q6PID6 262 aaPredicted RBP14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 C16orf89Q6UX73 402 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 ATG14Q6ZNE5 492 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 PLPPR4Q7Z2D5 763 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 SIX6OS1Q8N1H7 587 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 SDR16C5Q8N3Y7 309 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 Q8N9G6 341 aaPredicted RBP14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 KYQ8NBH2 561 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 PDZD8Q8NEN9 1154 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 SLC35B2Q8TB61 432 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 RSAD2Q8WXG1 361 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 ALPK1Q96QP1 1244 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 SH3GL1Q99961 368 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 FDXACB1Q9BRP7 624 aaPredicted RBP14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 SLC4A5Q9BY07 1137 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 IMPG2Q9BZV3 1241 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 IFT52Q9Y366 437 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 ST14Q9Y5Y6 855 aa14.27□□□□□ -0.13
GTF3C1-203ENST00000562609 MGAMO43451 1857 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 hCG_1818297A0A087WSY0 165 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 H0YJX3 145 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 PSMD11O00231 422 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 OGTO15294 1046 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 DYNC1LI2O43237 492 aaPredicted RBP14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 GUCY1B2O75343 617 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 CRHR1P34998 444 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 TPTEP56180 551 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 ARHGAP1Q07960 439 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 PPM1LQ5SGD2 360 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 LIN9Q5TKA1 542 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 USP43Q70EL4 1123 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 ITIH5Q86UX2 942 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 ZNF606Q8WXB4 792 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 LRTOMTQ8WZ04 291 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 CIB1Q99828 191 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 MROQ9BYG7 248 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 ANKRD60Q9BZ19 345 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 TRPV6Q9H1D0 765 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 AKT3Q9Y243 479 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 ATP11BQ9Y2G3 1177 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 STX16-NPEPL1H3BU86 382 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 SNAP91O60641 907 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 SEC24DO94855 1032 aaPredicted RBP14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 LGALS2P05162 132 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 FGF3P11487 239 aaPredicted RBP14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 NRLP54845 237 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 CDH8P55286 799 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 GALNT2Q10471 571 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 NFATC3Q12968 1075 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 SELENBP1Q13228 472 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 TXNRD3NBQ6F5E7 133 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 TAPT1Q6NXT6 567 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 MON1BQ7L1V2 547 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 SNX32Q86XE0 403 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 ADGRF2Q8IZF7 708 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 ABRAQ8N0Z2 381 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 FAM156AQ8NDB6 213 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 ACTL9Q8TC94 416 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 CAPSLQ8WWF8 208 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 PSD2Q9BQI7 771 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 RNF19AQ9NV58 838 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 CPSF3Q9UKF6 684 aaKnown RBP14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 PCDHGA3Q9Y5H0 932 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 TEX264Q9Y6I9 313 aa14.26□□□□□ -0.13
GTF3C1-203ENST00000562609 GPR25O00155 361 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms