RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 TSPY1Q01534 308 aa13.54□□□□□ -0.24
CLK3-206ENST00000562078 SURF1Q15526 300 aa13.54□□□□□ -0.24
CLK3-206ENST00000562078 IQSEC1Q6DN90 963 aa13.54□□□□□ -0.24
CLK3-206ENST00000562078 TMEM26Q6ZUK4 368 aa13.54□□□□□ -0.24
CLK3-206ENST00000562078 C11orf74Q86VG3 221 aa13.54□□□□□ -0.24
CLK3-206ENST00000562078 TMEM126BQ8IUX1 230 aa13.54□□□□□ -0.24
CLK3-206ENST00000562078 IGDCC3Q8IVU1 814 aa13.54□□□□□ -0.24
CLK3-206ENST00000562078 RNF148Q8N7C7 305 aa13.54□□□□□ -0.24
CLK3-206ENST00000562078 CXorf38Q8TB03 319 aa13.54□□□□□ -0.24
CLK3-206ENST00000562078 ARHGAP39Q9C0H5 1083 aa13.54□□□□□ -0.24
CLK3-206ENST00000562078 CXorf21Q9HAI6 301 aa13.54□□□□□ -0.24
CLK3-206ENST00000562078 PALMDQ9NP74 551 aa13.54□□□□□ -0.24
CLK3-206ENST00000562078 AKT3Q9Y243 479 aa13.54□□□□□ -0.24
CLK3-206ENST00000562078 USTQ9Y2C2 406 aa13.54□□□□□ -0.24
CLK3-206ENST00000562078 DNAJC16Q9Y2G8 782 aa13.54□□□□□ -0.24
CLK3-206ENST00000562078 A0A087WZ62 844 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 C1orf232A0A0U1RR37 186 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 TCRBV7S3A2A0A539 114 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 ZNF701M0R085 212 aaPredicted RBP13.53□□□□□ -0.24
CLK3-206ENST00000562078 SGK1O00141 431 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 TNNC2P02585 160 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 VTNP04004 478 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 ATP5BP06576 529 aaKnown RBP13.53□□□□□ -0.24
CLK3-206ENST00000562078 C8BP07358 591 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 ENO2P09104 434 aaPredicted RBP13.53□□□□□ -0.24
CLK3-206ENST00000562078 ATF7P17544 494 aaPredicted RBP13.53□□□□□ -0.24
CLK3-206ENST00000562078 THOP1P52888 689 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 MAPK10P53779 464 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 IFITM2Q01629 132 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 OXA1LQ15070 435 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 MGAT5BQ3V5L5 792 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 ZNF484Q5JVG2 852 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 VWA5B1Q5TIE3 1220 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 GALNT18Q6P9A2 607 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 MAVSQ7Z434 540 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 BTLAQ7Z6A9 289 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 PHF13Q86YI8 300 aaPredicted RBP13.53□□□□□ -0.24
CLK3-206ENST00000562078 TMEM102Q8N9M5 508 aaPredicted RBP13.53□□□□□ -0.24
CLK3-206ENST00000562078 BHLHE22Q8NFJ8 381 aaPredicted RBP13.53□□□□□ -0.24
CLK3-206ENST00000562078 EMID1Q96A84 441 aaPredicted RBP13.53□□□□□ -0.24
CLK3-206ENST00000562078 CMTM5Q96DZ9 223 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 OLFM1Q99784 485 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 FDXACB1Q9BRP7 624 aaPredicted RBP13.53□□□□□ -0.24
CLK3-206ENST00000562078 COQ10BQ9H8M1 238 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 CLK4Q9HAZ1 481 aaKnown RBP13.53□□□□□ -0.24
CLK3-206ENST00000562078 PNPLA3Q9NST1 481 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 STK39Q9UEW8 545 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 GJD2Q9UKL4 321 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 RALGAPA2Q2PPJ7 1873 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 GPR25O00155 361 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 RNASEH2AO75792 299 aaKnown RBP13.53□□□□□ -0.24
CLK3-206ENST00000562078 TOP3BO95985 862 aaKnown RBP13.53□□□□□ -0.24
CLK3-206ENST00000562078 ERBB2P04626 1255 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 NFICP08651 508 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 KRT19P08727 400 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 FGFR3P22607 806 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 NKX2-5P52952 324 aaPredicted RBP13.53□□□□□ -0.24
CLK3-206ENST00000562078 MS4A2Q01362 244 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 CDK18Q07002 472 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 PTP4A2Q12974 167 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 NME3Q13232 169 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 MAMLD1Q13495 774 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 PDPK2PQ6A1A2 396 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 PDZD8Q8NEN9 1154 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 TRUB1Q8WWH5 349 aaKnown RBP13.53□□□□□ -0.24
CLK3-206ENST00000562078 SLC44A1Q8WWI5 657 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 XYLT2Q9H1B5 865 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 RPF1Q9H9Y2 349 aaKnown RBP13.53□□□□□ -0.24
CLK3-206ENST00000562078 RABL2AQ9UBK7 228 aaPredicted RBP13.53□□□□□ -0.24
CLK3-206ENST00000562078 NXF1Q9UBU9 619 aaKnown RBP13.53□□□□□ -0.24
CLK3-206ENST00000562078 ARHGAP26Q9UNA1 814 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 TNFSF13BQ9Y275 285 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 FARP1Q9Y4F1 1045 aaPredicted RBP13.53□□□□□ -0.24
CLK3-206ENST00000562078 CPQQ9Y646 472 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 SCN1AP35498 2009 aa13.53□□□□□ -0.24
CLK3-206ENST00000562078 TCRBV9S1A1TA0A576 114 aa13.52□□□□□ -0.24
CLK3-206ENST00000562078 DCXO43602 365 aa13.52□□□□□ -0.24
CLK3-206ENST00000562078 B4GALT4O60513 344 aa13.52□□□□□ -0.24
CLK3-206ENST00000562078 MYO1DO94832 1006 aa13.52□□□□□ -0.24
CLK3-206ENST00000562078 PROSCO94903 275 aa13.52□□□□□ -0.24
CLK3-206ENST00000562078 KRT75O95678 551 aa13.52□□□□□ -0.24
CLK3-206ENST00000562078 ACAT1P24752 427 aaKnown RBP13.52□□□□□ -0.24
CLK3-206ENST00000562078 ASPAP45381 313 aa13.52□□□□□ -0.24
CLK3-206ENST00000562078 C1QBPQ07021 282 aaKnown RBP13.52□□□□□ -0.24
CLK3-206ENST00000562078 TRAF2Q12933 501 aa13.52□□□□□ -0.24
CLK3-206ENST00000562078 SELENBP1Q13228 472 aa13.52□□□□□ -0.24
CLK3-206ENST00000562078 LSM12Q3MHD2 195 aaKnown RBP13.52□□□□□ -0.24
CLK3-206ENST00000562078 PERM1Q5SV97 790 aa13.52□□□□□ -0.24
CLK3-206ENST00000562078 POLNQ7Z5Q5 900 aa13.52□□□□□ -0.24
CLK3-206ENST00000562078 ITIH5Q86UX2 942 aa13.52□□□□□ -0.24
CLK3-206ENST00000562078 REM2Q8IYK8 340 aaPredicted RBP13.52□□□□□ -0.24
CLK3-206ENST00000562078 BHMTQ93088 406 aa13.52□□□□□ -0.24
CLK3-206ENST00000562078 CPB2Q96IY4 423 aa13.52□□□□□ -0.24
CLK3-206ENST00000562078 KLHL32Q96NJ5 620 aa13.52□□□□□ -0.24
CLK3-206ENST00000562078 PRMT7Q9NVM4 692 aaPredicted RBP13.52□□□□□ -0.24
CLK3-206ENST00000562078 ST14Q9Y5Y6 855 aa13.52□□□□□ -0.24
CLK3-206ENST00000562078 PRSS51A0A1B0GVH4 220 aa13.52□□□□□ -0.25
CLK3-206ENST00000562078 KPNA4O00629 521 aaPredicted RBP13.52□□□□□ -0.25
CLK3-206ENST00000562078 DYNC1LI2O43237 492 aaPredicted RBP13.52□□□□□ -0.25
CLK3-206ENST00000562078 CSPG5O95196 566 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms