RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 MAP3K6O95382 1288 aa22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 RHOQP17081 205 aa22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 AVPR2P30518 371 aa22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 GRIA2P42262 883 aa22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 DARS2Q6PI48 645 aaKnown RBP22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 CDKL3Q8IVW4 592 aaPredicted RBP22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 MFN1Q8IWA4 741 aa22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 RTL3Q8N8U3 475 aaKnown RBP22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 CFAP69A5D8W1 941 aa22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 TBC1D3BA6NDS4 549 aa22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 DRGXA6NNA5 263 aa22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 HACD1B0YJ81 288 aa22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 SGK1O00141 431 aa22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 DYNC1I1O14576 645 aa22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 RNF40O75150 1001 aa22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 APODP05090 189 aa22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 STIP1P31948 543 aaKnown RBP22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 PTK6Q13882 451 aa22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 PDK1Q15118 436 aa22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 SUGP1Q8IWZ8 645 aaKnown RBP22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 CCHCR1Q8TD31 782 aa22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 GDF3Q9NR23 364 aa22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 ABCB8Q9NUT2 735 aa22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 RAB21Q9UL25 225 aa22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 SLC27A6Q9Y2P4 619 aa22.96■■□□□ 1.27
SYNGR3-202ENST00000562045 BCLAF3A2AJT9 711 aaKnown RBP22.95■■□□□ 1.26
SYNGR3-202ENST00000562045 PPP1R12AO14974 1030 aaPredicted RBP22.95■■□□□ 1.26
SYNGR3-202ENST00000562045 LUC7L3O95232 432 aaKnown RBP22.95■■□□□ 1.26
SYNGR3-202ENST00000562045 MX2P20592 715 aa22.95■■□□□ 1.26
SYNGR3-202ENST00000562045 RABGAP1LQ5R372 815 aa22.95■■□□□ 1.26
SYNGR3-202ENST00000562045 NPWQ8N729 165 aa22.95■■□□□ 1.26
SYNGR3-202ENST00000562045 CCDC89Q8N998 374 aa22.95■■□□□ 1.26
SYNGR3-202ENST00000562045 HINFPQ9BQA5 517 aa22.95■■□□□ 1.26
SYNGR3-202ENST00000562045 SLC2A11Q9BYW1 496 aa22.95■■□□□ 1.26
SYNGR3-202ENST00000562045 RETREG1Q9H6L5 497 aa22.95■■□□□ 1.26
SYNGR3-202ENST00000562045 TMEM248Q9NWD8 314 aa22.95■■□□□ 1.26
SYNGR3-202ENST00000562045 ZSCAN5CA6NGD5 496 aaPredicted RBP22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 ZNF189O75820 626 aaPredicted RBP22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 KIR2DL1P43626 348 aaPredicted RBP22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 VSNL1P62760 191 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 LMAN2Q12907 356 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 SLC45A4Q5BKX6 768 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 DGKKQ5KSL6 1271 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 CXorf57Q6NSI4 855 aaKnown RBP22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 NLRP14Q86W24 1093 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 FIBINQ8TAL6 211 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 TFB1MQ8WVM0 346 aaKnown RBP22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 SEC14L1Q92503 715 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 QKIQ96PU8 341 aaKnown RBP eCLIP22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 BRD8Q9H0E9 1235 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 ZNF212Q9UDV6 495 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 INTS6Q9UL03 887 aaKnown RBP22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 NEU2Q9Y3R4 380 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 A0A1B0GVM2 712 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 TYW5A2RUC4 315 aaKnown RBP22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 TCAF2A6NFQ2 919 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 BHMG1C9JSJ3 638 aaPredicted RBP22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 H0Y626 953 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 KRT14P02533 472 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 TNFRSF8P28908 595 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 RPS9P46781 194 aaKnown RBP22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 MTAPQ13126 283 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 C2orf27AQ580R0 203 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 DUPD1Q68J44 220 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 TFAP2DQ7Z6R9 452 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 KIAA0907Q7Z7F0 614 aaPredicted RBP22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 SORCS1Q8WY21 1168 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 CHRDQ9H2X0 955 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 NDFIP2Q9NV92 336 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 ASIC3Q9UHC3 531 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 GGA2Q9UJY4 613 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 CACNA1IQ9P0X4 2223 aa22.94■■□□□ 1.26
SYNGR3-202ENST00000562045 ESYT3A0FGR9 886 aa22.93■■□□□ 1.26
SYNGR3-202ENST00000562045 IFNB1P01574 187 aa22.93■■□□□ 1.26
SYNGR3-202ENST00000562045 DRG2P55039 364 aaKnown RBP22.93■■□□□ 1.26
SYNGR3-202ENST00000562045 CDH18Q13634 790 aa22.93■■□□□ 1.26
SYNGR3-202ENST00000562045 LRRC32Q14392 662 aa22.93■■□□□ 1.26
SYNGR3-202ENST00000562045 FUT11Q495W5 492 aa22.93■■□□□ 1.26
SYNGR3-202ENST00000562045 ADIPOR2Q86V24 386 aa22.93■■□□□ 1.26
SYNGR3-202ENST00000562045 RPLP0P6Q8NHW5 317 aa22.93■■□□□ 1.26
SYNGR3-202ENST00000562045 FERMT1Q9BQL6 677 aa22.93■■□□□ 1.26
SYNGR3-202ENST00000562045 TRIM31Q9BZY9 425 aa22.93■■□□□ 1.26
SYNGR3-202ENST00000562045 KLC2Q9H0B6 622 aa22.93■■□□□ 1.26
SYNGR3-202ENST00000562045 C10orf88Q9H8K7 445 aa22.93■■□□□ 1.26
SYNGR3-202ENST00000562045 PCDH9Q9HC56 1237 aa22.93■■□□□ 1.26
SYNGR3-202ENST00000562045 FAM114A2Q9NRY5 505 aa22.93■■□□□ 1.26
SYNGR3-202ENST00000562045 MUC22E2RYF6 1773 aaPredicted RBP22.93■■□□□ 1.26
SYNGR3-202ENST00000562045 RBL1P28749 1068 aa22.92■■□□□ 1.26
SYNGR3-202ENST00000562045 TIE1P35590 1138 aa22.92■■□□□ 1.26
SYNGR3-202ENST00000562045 GALNT2Q10471 571 aa22.92■■□□□ 1.26
SYNGR3-202ENST00000562045 CUL1Q13616 776 aa22.92■■□□□ 1.26
SYNGR3-202ENST00000562045 TTC39BQ5VTQ0 682 aaPredicted RBP22.92■■□□□ 1.26
SYNGR3-202ENST00000562045 EGFLAMQ63HQ2 1017 aa22.92■■□□□ 1.26
SYNGR3-202ENST00000562045 APCDD1Q8J025 514 aa22.92■■□□□ 1.26
SYNGR3-202ENST00000562045 CCDC33Q8N5R6 958 aa22.92■■□□□ 1.26
SYNGR3-202ENST00000562045 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.92■■□□□ 1.26
SYNGR3-202ENST00000562045 FAM71DQ8N9W8 422 aa22.92■■□□□ 1.26
SYNGR3-202ENST00000562045 USP33Q8TEY7 942 aa22.92■■□□□ 1.26
SYNGR3-202ENST00000562045 ACOX2Q99424 681 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms