RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 ITGA2BP08514 1039 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 ERVK-10P10266 1014 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 NEFHP12036 1026 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 ADRA1AP35348 466 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 PBX3P40426 434 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 HADHAP40939 763 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 MAGEA12P43365 314 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 MNX1P50219 401 aaPredicted RBP12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 SERPINB8P50452 374 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 RENBPP51606 427 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 LIMK2P53671 638 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 YBEYP58557 167 aaPredicted RBP12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 OLIG2Q13516 323 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 INSCQ1MX18 579 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 GALNTL6Q49A17 601 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 PCID2Q5JVF3 399 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 CERCAMQ5T4B2 595 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 ATG16L1Q676U5 607 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 RAP1GAP2Q684P5 730 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 TPGS2Q68CL5 300 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 PDPK2PQ6A1A2 396 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 KLHDC10Q6PID8 442 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 POTEHQ6S545 545 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 DEFB128Q7Z7B8 93 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 MIB1Q86YT6 1006 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 MICALL1Q8N3F8 863 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 PPHLN1Q8NEY8 458 aaKnown RBP12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 NSMCE1Q8WV22 266 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 FICDQ9BVA6 458 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 TSSK1BQ9BXA7 367 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 SLC25A51Q9H1U9 297 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 SP110Q9HB58 689 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 SLCO1B3Q9NPD5 702 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 NDFIP2Q9NV92 336 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 SIRPGQ9P1W8 387 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 CAPN7Q9Y6W3 813 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 SHROOM3Q8TF72 1996 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 ABHD14A-ACY1A0A1B0GW23 586 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 WDR91A4D1P6 747 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 TPP1O14773 563 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 TIMM44O43615 452 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 ATP9BO43861 1147 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 RAMP2O60895 175 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 PEX11BO96011 259 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 SOD2P04179 222 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 TACR2P21452 398 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 IL10RBQ08334 325 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 SETDB1Q15047 1291 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 C5orf22Q49AR2 442 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 SPDYAQ5MJ70 313 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 KIAA1841Q6NSI8 718 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 FBXL22Q6P050 247 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 PKN3Q6P5Z2 889 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 CES3Q6UWW8 571 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 CDHR3Q6ZTQ4 885 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 KCNMB4Q86W47 210 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 TEX26Q8N6G2 289 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 IPMKQ8NFU5 416 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 SPATA22Q8NHS9 363 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 GIPC2Q8TF65 315 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 C10orf82Q8WW14 230 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 IGSF8Q969P0 613 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 PLD4Q96BZ4 506 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 HMCESQ96FZ2 354 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 IMP4Q96G21 291 aaKnown RBP12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 ZNF558Q96NG5 402 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 APOL2Q9BQE5 337 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 VN1R3Q9BXE9 311 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 PRKD2Q9BZL6 878 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 VPS45Q9NRW7 570 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 C20orf96Q9NUD7 363 aaPredicted RBP12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 UBP1Q9NZI7 540 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 ZNF212Q9UDV6 495 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 DCDC2Q9UHG0 476 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 DNMT3LQ9UJW3 386 aa12.86□□□□□ -0.35
AC055717.2-201ENST00000561864 CFAP73A6NFT4 308 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 F5H5T6 163 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 H0YHG0 523 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 C2CD2LO14523 706 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 ADAM12O43184 909 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 EFCAB14O75071 495 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 UBOX5O94941 541 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 UPP2O95045 317 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 TBX18O95935 607 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 MYCP01106 439 aaPredicted RBP12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 ALDOAP04075 364 aaKnown RBP12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 MPOP05164 745 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 BPGMP07738 259 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 BGNP21810 368 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 OR1D2P34982 312 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 ATP5C1P36542 298 aaKnown RBP12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 SKIV2L2P42285 1042 aaKnown RBP12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 PDE1BQ01064 536 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 CDK18Q07002 472 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 SF3A3Q12874 501 aaKnown RBP eCLIP12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 SPRED3Q2MJR0 410 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 ALFQ53S48 1182 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 HECTD3Q5T447 861 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 TEDDM1Q5T9Z0 273 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms