RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	TAF12	Q16514	161 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	HSP90B2P	Q58FF3	399 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	MS4A13	Q5J8X5	152 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	AFMID	Q63HM1	303 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	NUGGC	Q68CJ6	796 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	LILRA6	Q6PI73	481 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	TMEM150A	Q86TG1	271 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	ITIH5	Q86UX2	942 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	ARHGAP12	Q8IWW6	846 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	TP53INP2	Q8IXH6	220 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	SLC44A3	Q8N4M1	653 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	LZTR1	Q8N653	840 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	NETO2	Q8NC67	525 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	ZBTB44	Q8NCP5	570 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	CCNY	Q8ND76	341 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	NETO1	Q8TDF5	533 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	PLD4	Q96BZ4	506 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	HDAC11	Q96DB2	347 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	P2RY11	Q96G91	374 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	PWWP2A	Q96N64	755 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	SPATA13	Q96N96	652 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	KLHL5	Q96PQ7	755 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	RBM15	Q96T37	977 aa	Known RBP eCLIP	7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	PRMT1	Q99873	361 aa	Known RBP	7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	FERMT1	Q9BQL6	677 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	ZNF334	Q9HCZ1	680 aa	Predicted RBP	7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	RAB6B	Q9NRW1	208 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	DNAJC17	Q9NVM6	304 aa	Known RBP	7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	GMEB2	Q9UKD1	530 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	ASB3	Q9Y575	518 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	IRAK3	Q9Y616	596 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	CLUH	O75153	1309 aa		7.7	□□□□□ -1.18
TPM1-231	ENST00000561395	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	TCRBV7S3A2	A0A539	114 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	GOLGA8M	H3BSY2	632 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	EIF3H	O15372	352 aa	Known RBP eCLIP	7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	MTSS1	O43312	755 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	RIPK2	O43353	540 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	OPA1	O60313	960 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	OPHN1	O60890	802 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	LILRB5	O75023	590 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	RNF40	O75150	1001 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	TTC4	O95801	387 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	GLUD1	P00367	558 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	F11	P03951	625 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	HMBS	P08397	361 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	SPATA31D3	P0C874	917 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	RHOQ	P17081	205 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	TPSB2	P20231	275 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	PML	P29590	882 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	FDFT1	P37268	417 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	IRAK1	P51617	712 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	EIF3B	P55884	814 aa	Known RBP	7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	ARL4C	P56559	192 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	COG7	P83436	770 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	GAD2	Q05329	585 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	ZNF33A	Q06730	810 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	ZNF844	Q08AG5	666 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	SPEM2	Q0P670	501 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	CBLB	Q13191	982 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	SEMA5A	Q13591	1074 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	AUH	Q13825	339 aa	Known RBP	7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	SLC29A2	Q14542	456 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	TPSAB1	Q15661	275 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	HIF1A	Q16665	826 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	ANKRD20A2	Q5SQ80	823 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	UBAP2	Q5T6F2	1119 aa	Known RBP	7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	ANKRD20A1	Q5TYW2	823 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	ANKRD20A3	Q5VUR7	823 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	LRRC31	Q6UY01	552 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	PPP1R21	Q6ZMI0	780 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	ARHGEF18	Q6ZSZ5	1173 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	SPATA31D4	Q6ZUB0	917 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	CENPU	Q71F23	418 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	NLRP14	Q86W24	1093 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	CHSY1	Q86X52	802 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	TMC8	Q8IU68	726 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	ZNF567	Q8N184	647 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	TAB3	Q8N5C8	712 aa	Predicted RBP	7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	GOLGA6L1	Q8N7Z2	621 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	RTL3	Q8N8U3	475 aa	Known RBP	7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	OR2W6P	Q8NHA6	318 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	NXPE3	Q969Y0	559 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	ZBTB9	Q96C00	473 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	SHD	Q96IW2	340 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	CELF6	Q96J87	481 aa	Known RBP	7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	TTC25	Q96NG3	672 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	FRMD8	Q9BZ67	464 aa	Predicted RBP	7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	ZYG11B	Q9C0D3	744 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	NACA2	Q9H009	215 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	IL21	Q9HBE4	155 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	SAYSD1	Q9NPB0	183 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	TMEM248	Q9NWD8	314 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	ZSCAN32	Q9NX65	697 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	NINJ2	Q9NZG7	142 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	SEPT10	Q9P0V9	454 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	EPS15L1	Q9UBC2	864 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	VANGL2	Q9ULK5	521 aa		7.69	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms