RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 CXorf51AA0A1B0GTR3 108 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 A0A1B0GTW7 788 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 F5H5T6 163 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 GIPC1O14908 333 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 EPHB6O15197 1021 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 SYNCRIPO60506 623 aaKnown RBP7.08□□□□□ -1.28
SPG11-224ENST00000561268 SIN3BO75182 1162 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 SASH3O75995 380 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 CYP1A1P04798 512 aaPredicted RBP7.08□□□□□ -1.28
SPG11-224ENST00000561268 IGHV4-34P06331 123 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 CD59P13987 128 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 POLR2EP19388 210 aaKnown RBP7.08□□□□□ -1.28
SPG11-224ENST00000561268 OAS2P29728 719 aaKnown RBP7.08□□□□□ -1.28
SPG11-224ENST00000561268 CCR1P32246 355 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 ACSL1P33121 698 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 FLT3P36888 993 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 GRIA4P48058 902 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 CXCR3P49682 368 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 NOVA1P51513 510 aaKnown RBP7.08□□□□□ -1.28
SPG11-224ENST00000561268 SLC6A3Q01959 620 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 NRG1Q02297 640 aaPredicted RBP7.08□□□□□ -1.28
SPG11-224ENST00000561268 ZNF252P-AS1Q0IIN9 211 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 KIF5AQ12840 1032 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 ELAVL3Q14576 367 aaKnown RBP7.08□□□□□ -1.28
SPG11-224ENST00000561268 SPA17Q15506 151 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 FNDC3BQ53EP0 1204 aaKnown RBP7.08□□□□□ -1.28
SPG11-224ENST00000561268 WDR45BQ5MNZ6 344 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 C9orf64Q5T6V5 341 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 ACBD5Q5T8D3 534 aaPredicted RBP7.08□□□□□ -1.28
SPG11-224ENST00000561268 SH3PXD2AQ5TCZ1 1133 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 MANEALQ5VSG8 457 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 RAP1GAP2Q684P5 730 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 FBXL22Q6P050 247 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 WDR59Q6PJI9 974 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 DBX2Q6ZNG2 339 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 GLRX5Q86SX6 157 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 NOP9Q86U38 636 aaKnown RBP7.08□□□□□ -1.28
SPG11-224ENST00000561268 LAPTM4BQ86VI4 370 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 ZNF677Q86XU0 584 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 XYLT1Q86Y38 959 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 PASD1Q8IV76 773 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 LGI2Q8N0V4 545 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 MINDY1Q8N5J2 469 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 ZNF366Q8N895 744 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 LRRN4CLQ8ND94 238 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 COG1Q8WTW3 980 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 PTPRN2Q92932 1015 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 CNTNAP3BQ96NU0 1288 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 GPR174Q9BXC1 333 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 CNTNAP3Q9BZ76 1288 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 PABPC3Q9H361 631 aaKnown RBP7.08□□□□□ -1.28
SPG11-224ENST00000561268 SGK2Q9HBY8 427 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 ANLNQ9NQW6 1124 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 PIGVQ9NUD9 493 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 DDIT4Q9NX09 232 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 KIAA1522Q9P206 1035 aaPredicted RBP7.08□□□□□ -1.28
SPG11-224ENST00000561268 SERGEFQ9UGK8 458 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 TMEM59LQ9UK28 342 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 ANGPTL2Q9UKU9 493 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 TPX2Q9ULW0 747 aaKnown RBP7.08□□□□□ -1.28
SPG11-224ENST00000561268 HS3ST2Q9Y278 367 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 TBC1D30Q9Y2I9 924 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 CEP83Q9Y592 693 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 PCDHGA10Q9Y5H3 936 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 SLCO1B1Q9Y6L6 691 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 WDFY3Q8IZQ1 3526 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 APC2O95996 2303 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 EDDM13A0A1B0GTR0 161 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 TCRBV5S1A1TA0A578 114 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 GRID2IPA4D2P6 1211 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 FAM221BA6H8Z2 402 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 CAPN9O14815 690 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 ALOX15BO15296 676 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 ZBTB24O43167 697 aaPredicted RBP7.07□□□□□ -1.28
SPG11-224ENST00000561268 LATO43561 262 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 ATP9BO43861 1147 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 CBFA2T3O75081 653 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 NDUFS2O75306 463 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 PAGE1O75459 146 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 ENDOD1O94919 500 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 SEMA4FO95754 770 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 MOCS2O96007 188 aaPredicted RBP7.07□□□□□ -1.28
SPG11-224ENST00000561268 CFIP05156 583 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 SYPP08247 313 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 TFE3P19532 575 aaPredicted RBP7.07□□□□□ -1.28
SPG11-224ENST00000561268 MMP8P22894 467 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 MZF1P28698 734 aaPredicted RBP7.07□□□□□ -1.28
SPG11-224ENST00000561268 DRD3P35462 400 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 CTSOP43234 321 aaPredicted RBP7.07□□□□□ -1.28
SPG11-224ENST00000561268 OXCT1P55809 520 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 SNX16P57768 344 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 FMO1Q01740 532 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 CENPCQ03188 943 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 GFPT1Q06210 699 aaPredicted RBP7.07□□□□□ -1.28
SPG11-224ENST00000561268 SULT2A1Q06520 285 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 PTP4A2Q12974 167 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 HNRNPDQ14103 355 aaKnown RBP7.07□□□□□ -1.28
SPG11-224ENST00000561268 CASP8Q14790 479 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 CST6Q15828 149 aa7.07□□□□□ -1.28
SPG11-224ENST00000561268 SLC25A52Q3SY17 297 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms