RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 HOXA6P31267 233 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 PXNP49023 591 aaPredicted RBP10.92□□□□□ -0.66
TPM1-229ENST00000561242 SERPINH1P50454 418 aaKnown RBP10.92□□□□□ -0.66
TPM1-229ENST00000561242 TAS2R40P59535 323 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 POLR2LP62875 67 aaKnown RBP10.92□□□□□ -0.66
TPM1-229ENST00000561242 SERINC3Q13530 473 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 FBXL19Q6PCT2 694 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 TSSK4Q6SA08 328 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 KIAA0907Q7Z7F0 614 aaPredicted RBP10.92□□□□□ -0.66
TPM1-229ENST00000561242 MMAAQ8IVH4 418 aaKnown RBP10.92□□□□□ -0.66
TPM1-229ENST00000561242 RGL4Q8IZJ4 473 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 PHTF2Q8N3S3 785 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 SH2D3CQ8N5H7 860 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 ARFGAP1Q8N6T3 406 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 WFDC5Q8TCV5 224 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 FOXJ1Q92949 421 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 ISG20Q96AZ6 181 aaKnown RBP10.92□□□□□ -0.66
TPM1-229ENST00000561242 HMCESQ96FZ2 354 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 LRIG1Q96JA1 1093 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 ZNF599Q96NL3 588 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 OSBPL1AQ9BXW6 950 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 ADAM33Q9BZ11 813 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 TPSD1Q9BZJ3 242 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 SLC39A8Q9C0K1 460 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 LACRTQ9GZZ8 138 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 BTBD1Q9H0C5 482 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 SCUBE2Q9NQ36 999 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 GOLGA6AQ9NYA3 693 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 HECAQ9UBI9 543 aaPredicted RBP10.92□□□□□ -0.66
TPM1-229ENST00000561242 EBF1Q9UH73 591 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 IL36AQ9UHA7 158 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 SLCO3A1Q9UIG8 710 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 TFR2Q9UP52 801 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 DUSP10Q9Y6W6 482 aa10.92□□□□□ -0.66
TPM1-229ENST00000561242 A0A1W2PQ67 120 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 FAM47DPA6NHR8 397 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 MEI4A8MW99 385 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 WASH3PC4AMC7 463 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 MCF2LO15068 1137 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 ATP9BO43861 1147 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 CST8O60676 142 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 SIN3BO75182 1162 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 GNSP15586 552 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 COL9A1P20849 921 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 CCNCP24863 283 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 CHRNA3P32297 505 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 SLC8A1P32418 973 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 CTNNA1P35221 906 aaKnown RBP10.91□□□□□ -0.66
TPM1-229ENST00000561242 ACVRL1P37023 503 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 CTSOP43234 321 aaPredicted RBP10.91□□□□□ -0.66
TPM1-229ENST00000561242 PSMD8P48556 350 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 STK19P49842 368 aaPredicted RBP10.91□□□□□ -0.66
TPM1-229ENST00000561242 VASPP50552 380 aaPredicted RBP10.91□□□□□ -0.66
TPM1-229ENST00000561242 RPL6Q02878 288 aaKnown RBP10.91□□□□□ -0.66
TPM1-229ENST00000561242 MMRN1Q13201 1228 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 PRPSAP1Q14558 356 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 LBRQ14739 615 aaKnown RBP10.91□□□□□ -0.66
TPM1-229ENST00000561242 ATP13A4Q4VNC1 1196 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 ZNF569Q5MCW4 686 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 WDR45BQ5MNZ6 344 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 MANEALQ5VSG8 457 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 DARS2Q6PI48 645 aaKnown RBP10.91□□□□□ -0.66
TPM1-229ENST00000561242 LEKR1Q6ZMV7 388 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 SPOCD1Q6ZMY3 1216 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 ZNF662Q6ZS27 426 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 NLRP14Q86W24 1093 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 TMEM139Q8IV31 216 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 ZNF683Q8IZ20 524 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 STK40Q8N2I9 435 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 HDDC3Q8N4P3 179 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 ZNF366Q8N895 744 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 OLIG1Q8TAK6 271 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 TFB1MQ8WVM0 346 aaKnown RBP10.91□□□□□ -0.66
TPM1-229ENST00000561242 RAPGEF5Q92565 580 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 MYEOVQ96EZ4 313 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 ACOX2Q99424 681 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 HEMGNQ9BXL5 484 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 ZDHHC6Q9H6R6 413 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 ATP13A3Q9H7F0 1226 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 FBXL12Q9NXK8 326 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 DLGAP2Q9P1A6 1054 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 NCDNQ9UBB6 729 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 TPX2Q9ULW0 747 aaKnown RBP10.91□□□□□ -0.66
TPM1-229ENST00000561242 HS3ST2Q9Y278 367 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 PTPRDP23468 1912 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 DENND4AQ7Z401 1863 aa10.91□□□□□ -0.66
TPM1-229ENST00000561242 TBC1D3DA0A087WVF3 549 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 TBC1D3IA0A087WXS9 549 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 TBC1D3EA0A087X179 549 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 TBC1D3KA0A087X1G2 549 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.9□□□□□ -0.66
TPM1-229ENST00000561242 GRID2IPA4D2P6 1211 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 TBC1D3FA6NER0 549 aaPredicted RBP10.9□□□□□ -0.66
TPM1-229ENST00000561242 TBC1D3LB9A6J9 549 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 KCNK3O14649 394 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 GSRP00390 522 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 TBC1D3HP0C7X1 549 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 SRCP12931 536 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 PRKCHP24723 683 aa10.9□□□□□ -0.66
TPM1-229ENST00000561242 SERPINA4P29622 427 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms