RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 SLC22A17Q8WUG5 538 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 ARHGEF2Q92974 986 aaKnown RBP17.45■□□□□ 0.38
HDDC3-206ENST00000561036 PRICKLE1Q96MT3 831 aaPredicted RBP17.45■□□□□ 0.38
HDDC3-206ENST00000561036 CYP2S1Q96SQ9 504 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 CORO1BQ9BR76 489 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 ATXN3LQ9H3M9 355 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 MAN1C1Q9NR34 630 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 SMPD4Q9NXE4 827 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 BFARQ9NZS9 450 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 SENP1Q9P0U3 644 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 ZMYM5Q9UJ78 669 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 TTLL3Q9Y4R7 772 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 MAD1L1Q9Y6D9 718 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 NYNRINQ9P2P1 1898 aaKnown RBP17.45■□□□□ 0.38
HDDC3-206ENST00000561036 MTCL1Q9Y4B5 1905 aaKnown RBP17.45■□□□□ 0.38
HDDC3-206ENST00000561036 SHROOM3Q8TF72 1996 aa17.44■□□□□ 0.38
HDDC3-206ENST00000561036 POC1B-GALNT4F8VUJ3 575 aa17.44■□□□□ 0.38
HDDC3-206ENST00000561036 J3KR12 359 aa17.44■□□□□ 0.38
HDDC3-206ENST00000561036 SHOX2O60902 331 aaPredicted RBP17.44■□□□□ 0.38
HDDC3-206ENST00000561036 XYLBO75191 536 aa17.44■□□□□ 0.38
HDDC3-206ENST00000561036 CA3P07451 260 aa17.44■□□□□ 0.38
HDDC3-206ENST00000561036 MYL4P12829 197 aa17.44■□□□□ 0.38
HDDC3-206ENST00000561036 PGAM1P18669 254 aa17.44■□□□□ 0.38
HDDC3-206ENST00000561036 MGAT1P26572 445 aa17.44■□□□□ 0.38
HDDC3-206ENST00000561036 MSH2P43246 934 aa17.44■□□□□ 0.38
HDDC3-206ENST00000561036 RPS24P62847 133 aaKnown RBP17.44■□□□□ 0.38
HDDC3-206ENST00000561036 CYP4F8P98187 520 aa17.44■□□□□ 0.38
HDDC3-206ENST00000561036 MPP3Q13368 585 aa17.44■□□□□ 0.38
HDDC3-206ENST00000561036 MTM1Q13496 603 aa17.44■□□□□ 0.38
HDDC3-206ENST00000561036 C9orf50Q5SZB4 431 aa17.44■□□□□ 0.38
HDDC3-206ENST00000561036 ADGRD1Q6QNK2 874 aa17.44■□□□□ 0.38
HDDC3-206ENST00000561036 UNC5AQ6ZN44 842 aa17.44■□□□□ 0.38
HDDC3-206ENST00000561036 CCDC117Q8IWD4 279 aaPredicted RBP17.44■□□□□ 0.38
HDDC3-206ENST00000561036 CPXM2Q8N436 756 aa17.44■□□□□ 0.38
HDDC3-206ENST00000561036 MAB21L3Q8N8X9 362 aa17.44■□□□□ 0.38
HDDC3-206ENST00000561036 WBP2Q969T9 261 aa17.44■□□□□ 0.38
HDDC3-206ENST00000561036 OXNAD1Q96HP4 312 aaPredicted RBP17.44■□□□□ 0.38
HDDC3-206ENST00000561036 CAPS2Q9BXY5 557 aa17.44■□□□□ 0.38
HDDC3-206ENST00000561036 VPS45Q9NRW7 570 aa17.44■□□□□ 0.38
HDDC3-206ENST00000561036 DENND4CQ5VZ89 1909 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 TYW5A2RUC4 315 aaKnown RBP17.43■□□□□ 0.38
HDDC3-206ENST00000561036 KDELR3O43731 214 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 ALDH1A2O94788 518 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 ARHGEF15O94989 841 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 CKMP06732 381 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 MYOGP15173 224 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 MAGEA10P43363 369 aaPredicted RBP17.43■□□□□ 0.38
HDDC3-206ENST00000561036 SESN2P58004 480 aaPredicted RBP17.43■□□□□ 0.38
HDDC3-206ENST00000561036 CDH17Q12864 832 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 GPM6BQ13491 265 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 SPARCL1Q14515 664 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 RFTN1Q14699 578 aaPredicted RBP17.43■□□□□ 0.38
HDDC3-206ENST00000561036 SHHQ15465 462 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 SKIDA1Q1XH10 827 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 ARHGAP15Q53QZ3 475 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 SPANXN3Q5MJ09 141 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 EXOC3L1Q86VI1 746 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 ZNF354CQ86Y25 554 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 BBS5Q8N3I7 341 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 MPP5Q8N3R9 675 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 OR52K1Q8NGK4 314 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 SLC44A1Q8WWI5 657 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 ARNTL2Q8WYA1 636 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 IMP4Q96G21 291 aaKnown RBP17.43■□□□□ 0.38
HDDC3-206ENST00000561036 PAFAH2Q99487 392 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 IL22Q9GZX6 179 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 LMAN2LQ9H0V9 348 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 PDFQ9HBH1 243 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 PLAC1Q9HBJ0 212 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 ZDHHC7Q9NXF8 308 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 SAMD15Q9P1V8 674 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 CTNNAL1Q9UBT7 734 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 ARHGAP26Q9UNA1 814 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 SH3BP1Q9Y3L3 701 aa17.43■□□□□ 0.38
HDDC3-206ENST00000561036 A0A1W2PRU2 124 aa17.42■□□□□ 0.38
HDDC3-206ENST00000561036 C1QAP02745 245 aa17.42■□□□□ 0.38
HDDC3-206ENST00000561036 RHOCP08134 193 aa17.42■□□□□ 0.38
HDDC3-206ENST00000561036 ADRA1AP35348 466 aa17.42■□□□□ 0.38
HDDC3-206ENST00000561036 IRS1P35568 1242 aa17.42■□□□□ 0.38
HDDC3-206ENST00000561036 ACVRL1P37023 503 aa17.42■□□□□ 0.38
HDDC3-206ENST00000561036 MDH1P40925 334 aaKnown RBP17.42■□□□□ 0.38
HDDC3-206ENST00000561036 ATP1A2P50993 1020 aa17.42■□□□□ 0.38
HDDC3-206ENST00000561036 SLC10A7Q0GE19 358 aa17.42■□□□□ 0.38
HDDC3-206ENST00000561036 NAB1Q13506 487 aa17.42■□□□□ 0.38
HDDC3-206ENST00000561036 LBRQ14739 615 aaKnown RBP17.42■□□□□ 0.38
HDDC3-206ENST00000561036 TMED2Q15363 201 aa17.42■□□□□ 0.38
HDDC3-206ENST00000561036 SLC14A2Q15849 920 aa17.42■□□□□ 0.38
HDDC3-206ENST00000561036 CASC4Q6P4E1 433 aa17.42■□□□□ 0.38
HDDC3-206ENST00000561036 DNAAF3Q8N9W5 541 aa17.42■□□□□ 0.38
HDDC3-206ENST00000561036 TTC17Q96AE7 1141 aa17.42■□□□□ 0.38
HDDC3-206ENST00000561036 CENPTQ96BT3 561 aa17.42■□□□□ 0.38
HDDC3-206ENST00000561036 PABPC5Q96DU9 382 aaKnown RBP17.42■□□□□ 0.38
HDDC3-206ENST00000561036 TMA16Q96EY4 203 aaKnown RBP17.42■□□□□ 0.38
HDDC3-206ENST00000561036 ZNF419Q96HQ0 510 aaPredicted RBP17.42■□□□□ 0.38
HDDC3-206ENST00000561036 TBL1YQ9BQ87 522 aa17.42■□□□□ 0.38
HDDC3-206ENST00000561036 SLC46A2Q9BY10 475 aa17.42■□□□□ 0.38
HDDC3-206ENST00000561036 ACE2Q9BYF1 805 aaPredicted RBP17.42■□□□□ 0.38
HDDC3-206ENST00000561036 TASP1Q9H6P5 420 aa17.42■□□□□ 0.38
HDDC3-206ENST00000561036 NT5MQ9NPB1 228 aa17.42■□□□□ 0.38
HDDC3-206ENST00000561036 MOCS1Q9NZB8 636 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms