RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 TMEM9BQ9NQ34 198 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 NDFIP2Q9NV92 336 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 TMEM248Q9NWD8 314 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 GPATCH2LQ9NWQ4 482 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 SERGEFQ9UGK8 458 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 EVLQ9UI08 416 aaPredicted RBP13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 EIF2B4Q9UI10 523 aaKnown RBP13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 SLC6A14Q9UN76 642 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 AP4E1Q9UPM8 1137 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 HS3ST2Q9Y278 367 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 SPTBN4Q9H254 2564 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 LAMA1P25391 3075 aa13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 A0A087X0T9 212 aa13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 LRRC72A6NJI9 287 aa13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 C4orf47A7E2U8 309 aa13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 SERPINF2P08697 491 aa13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 FAM228BP0C875 321 aa13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 ACVRL1P37023 503 aa13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 EIF4A3P38919 411 aaKnown RBP13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 SSR1P43307 286 aaKnown RBP13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 VASPP50552 380 aaPredicted RBP13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 CLCN6P51797 869 aa13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 PPP6R3Q5H9R7 873 aaPredicted RBP13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 ERMARDQ5T6L9 678 aa13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 DAB2IPQ5VWQ8 1189 aa13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 C22orf39Q6P5X5 142 aa13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 ALKBH5Q6P6C2 394 aaKnown RBP13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 NLRP14Q86W24 1093 aa13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 RYBPQ8N488 228 aaPredicted RBP13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 OR8K1Q8NGG5 319 aa13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 PIP4K2CQ8TBX8 421 aa13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 TRIM5Q9C035 493 aa13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 PCED1AQ9H1Q7 454 aa13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 MAGEH1Q9H213 219 aa13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 RETREG1Q9H6L5 497 aa13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 DYRK4Q9NR20 520 aa13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 ARHGAP20Q9P2F6 1191 aa13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 NYNRINQ9P2P1 1898 aaKnown RBP13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 FZD4Q9ULV1 537 aa13.26□□□□□ -0.29
CTDSPL2-209ENST00000560620 TBC1D3DA0A087WVF3 549 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 TBC1D3IA0A087WXS9 549 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 TBC1D3EA0A087X179 549 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 TBC1D3KA0A087X1G2 549 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 A0A1B0GTW7 788 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 TBC1D3FA6NER0 549 aaPredicted RBP13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 TBC1D3LB9A6J9 549 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 EEF2KO00418 725 aaKnown RBP13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 KPNA3O00505 521 aaPredicted RBP13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 MCF2LO15068 1137 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 ALOX15BO15296 676 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 BCAT2O15382 392 aaPredicted RBP13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 FGF10O15520 208 aaPredicted RBP13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 SMAD6O43541 496 aaKnown RBP13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 SYPP08247 313 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 TBC1D3HP0C7X1 549 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 GOT1P17174 413 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 SERPINH1P50454 418 aaKnown RBP13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 LIMK1P53667 647 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 GEMIN4P57678 1058 aaKnown RBP13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 SLC20A2Q08357 652 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 PEAR1Q5VY43 1037 aaPredicted RBP13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 TBC1D3GQ6DHY5 549 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 TBC1D3CQ6IPX1 549 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 NCEH1Q6PIU2 408 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 LEKR1Q6ZMV7 388 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 ERMP1Q7Z2K6 904 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 ADAT2Q7Z6V5 191 aaKnown RBP13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 VSTM4Q8IW00 320 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 TBC1D3Q8IZP1 549 aaPredicted RBP13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 AADATQ8N5Z0 425 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 GRIN3AQ8TCU5 1115 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 FNIP1Q8TF40 1166 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 ARHGEF2Q92974 986 aaKnown RBP13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 BIRC7Q96CA5 298 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 NCAPGQ9BPX3 1015 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 SNRNP25Q9BV90 132 aaKnown RBP13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 NUP85Q9BW27 656 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 ZNF212Q9UDV6 495 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 ANAPC7Q9UJX3 599 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 FCF1Q9Y324 198 aaKnown RBP13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 ADAMTS9Q9P2N4 1935 aa13.25□□□□□ -0.29
CTDSPL2-209ENST00000560620 PI4KAP42356 2102 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 NUMA1Q14980 2115 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 PLK4O00444 970 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 ARHGAP33O14559 1287 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 BUB1O43683 1085 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 AKR1B10O60218 316 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 PRNPP04156 253 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 MIPP30301 263 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 CHRNA3P32297 505 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 METAP1P53582 386 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 GALCP54803 685 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 ADKP55263 362 aaKnown RBP13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 ARF5P84085 180 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 ZNF252P-AS1Q0IIN9 211 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 ARTNQ5T4W7 220 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 KIAA0895LQ68EN5 471 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 RTL3Q8N8U3 475 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms