RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 PMF1Q6P1K2 205 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 Q6ZVU0 165 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 PTRH1Q86Y79 214 aaKnown RBP9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 DCP2Q8IU60 420 aaKnown RBP9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 FBXO39Q8N4B4 442 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 DQX1Q8TE96 717 aaKnown RBP9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 SLC35F5Q8WV83 523 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 IRGQQ8WZA9 623 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 ALG14Q96F25 216 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 EEF2KMTQ96G04 330 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 LIN37Q96GY3 246 aaPredicted RBP9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 CCDC3Q9BQI4 270 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 BOCQ9BWV1 1114 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 MAGEF1Q9HAY2 307 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 TMEM8AQ9HCN3 771 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 GEMIN8Q9NWZ8 242 aaKnown RBP9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 HESX1Q9UBX0 185 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 ACSL6Q9UKU0 697 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 TRAF3IP3Q9Y228 551 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 TLR6Q9Y2C9 796 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 A6NNZ2 444 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 RIOK3O14730 519 aaKnown RBP9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 TPP1O14773 563 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 SPINT1O43278 529 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 GCATO75600 419 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 PCDH8O95206 1070 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 MOCS2O96007 188 aaPredicted RBP9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 LIPCP11150 499 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 HGFP14210 728 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 PDCP20941 246 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 SPIDRQ14159 915 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 FGL2Q14314 439 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 NR0B2Q15466 257 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 C8orf34Q49A92 452 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 TMEM259Q4ZIN3 620 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 INTS8Q75QN2 995 aaKnown RBP9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 RAB11FIP2Q7L804 512 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 PTAR1Q7Z6K3 402 aaPredicted RBP9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 B3GNT8Q7Z7M8 397 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 VASH2Q86V25 355 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 SLC35F3Q8IY50 421 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 CCAR2Q8N163 923 aaKnown RBP9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 OR52K2Q8NGK3 314 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 WDR48Q8TAF3 677 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 FAM174AQ8TBP5 190 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 HTR3CQ8WXA8 447 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 ERCC4Q92889 916 aaPredicted RBP9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 SERPINB11Q96P15 392 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 IL12RB2Q99665 862 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 FUCA2Q9BTY2 467 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 EPN3Q9H201 632 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 IGSF5Q9NSI5 407 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 RAB20Q9NX57 234 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 NCKIPSDQ9NZQ3 722 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 NAALADL1Q9UQQ1 740 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 PCDHGA4Q9Y5G9 962 aa9.18□□□□□ -0.94
RABGGTA-217ENST00000560521 H3BM21 787 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 O00370 1275 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 RAD51BO15315 384 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 CALUO43852 315 aaPredicted RBP9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 BNIP3LO60238 219 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 CUTAO60888 179 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 PAK4O96013 591 aaPredicted RBP9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 SETSIPP0DME0 302 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 VDRP11473 427 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 KRT13P13646 458 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 CD19P15391 556 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 JUNDP17535 347 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 NR2F2P24468 414 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 FOXK1P85037 733 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 ENPEPQ07075 957 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 EIF2B5Q13144 721 aaKnown RBP9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 NNTQ13423 1086 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 CUL4AQ13619 759 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 NFIL3Q16649 462 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 ZC3H12AQ5D1E8 599 aaKnown RBP9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 MANEAQ5SRI9 462 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 SYPL2Q5VXT5 272 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 HIST2H2BCQ6DN03 193 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 CXorf57Q6NSI4 855 aaKnown RBP9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 LCLAT1Q6UWP7 414 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 KYAT3Q6YP21 454 aaKnown RBP9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 PARGQ86W56 976 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 CHSY1Q86X52 802 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 CIR1Q86X95 450 aaPredicted RBP9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 JAMLQ86YT9 394 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 FAM186BQ8IYM0 893 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 RBFAQ8N0V3 343 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 SH2D3CQ8N5H7 860 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 UBR7Q8N806 425 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 FBXL13Q8NEE6 735 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 LMX1AQ8TE12 382 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 TFAP2BQ92481 460 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 PPP1R13BQ96KQ4 1090 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 PRMT1Q99873 361 aaKnown RBP9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 ZSWIM1Q9BR11 485 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 FEM1AQ9BSK4 669 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 SLC17A9Q9BYT1 436 aa9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 TCEAL2Q9H3H9 227 aaPredicted RBP9.17□□□□□ -0.94
RABGGTA-217ENST00000560521 SLC25A13Q9UJS0 675 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms