RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 ARL4CP56559 192 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 GEMIN4P57678 1058 aaKnown RBP8.78□□□□□ -1
TRAF3-209ENST00000560463 ZBTB17Q13105 803 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 CDH18Q13634 790 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 CBX2Q14781 532 aaPredicted RBP8.78□□□□□ -1
TRAF3-209ENST00000560463 CASP8Q14790 479 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 HIF1AQ16665 826 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 CFAP58Q5T655 872 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 FYB2Q5VWT5 728 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 RNF219Q5W0B1 726 aaPredicted RBP8.78□□□□□ -1
TRAF3-209ENST00000560463 ALS2CLQ60I27 953 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 IL31Q6EBC2 164 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 CXorf57Q6NSI4 855 aaKnown RBP8.78□□□□□ -1
TRAF3-209ENST00000560463 ARHGAP36Q6ZRI8 547 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 CENPUQ71F23 418 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 METTL3Q86U44 580 aaKnown RBP8.78□□□□□ -1
TRAF3-209ENST00000560463 MFN1Q8IWA4 741 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 NPAS3Q8IXF0 933 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 KLHDC8BQ8IXV7 354 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 ADGRG2Q8IZP9 1017 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 TTC16Q8NEE8 873 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 BPIFB1Q8TDL5 484 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 LRRN4Q8WUT4 740 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 DEPDC1BQ8WUY9 529 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 OSCP1Q8WVF1 389 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 FGF13Q92913 245 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 IRF7Q92985 503 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 ACDQ96AP0 544 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 LRRC39Q96DD0 335 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 PABPC5Q96DU9 382 aaKnown RBP8.78□□□□□ -1
TRAF3-209ENST00000560463 TTC25Q96NG3 672 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 NECTIN4Q96NY8 510 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 AGAP3Q96P47 875 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 FCRL5Q96RD9 977 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 RBM15Q96T37 977 aaKnown RBP eCLIP8.78□□□□□ -1
TRAF3-209ENST00000560463 GAS2L1Q99501 681 aaPredicted RBP8.78□□□□□ -1
TRAF3-209ENST00000560463 FEM1AQ9BSK4 669 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 C2orf49Q9BVC5 232 aaPredicted RBP8.78□□□□□ -1
TRAF3-209ENST00000560463 TXLNGYQ9BZA5 131 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 SMG9Q9H0W8 520 aaKnown RBP8.78□□□□□ -1
TRAF3-209ENST00000560463 MUC3BQ9H195 1237 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 S1PR5Q9H228 398 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 TTYH1Q9H313 450 aaPredicted RBP8.78□□□□□ -1
TRAF3-209ENST00000560463 PABPC3Q9H361 631 aaKnown RBP8.78□□□□□ -1
TRAF3-209ENST00000560463 PDFQ9HBH1 243 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 XAB2Q9HCS7 855 aaKnown RBP8.78□□□□□ -1
TRAF3-209ENST00000560463 ATP13A1Q9HD20 1204 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 SPHK2Q9NRA0 654 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 RBM22Q9NW64 420 aaKnown RBP eCLIP8.78□□□□□ -1
TRAF3-209ENST00000560463 MARK1Q9P0L2 795 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 CLEC1BQ9P126 229 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 KIAA1522Q9P206 1035 aaPredicted RBP8.78□□□□□ -1
TRAF3-209ENST00000560463 RSPH14Q9UHP6 348 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 CDH7Q9ULB5 785 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 ATP8A1Q9Y2Q0 1164 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 MUC22E2RYF6 1773 aaPredicted RBP8.78□□□□□ -1
TRAF3-209ENST00000560463 A0A0D9SEW6 157 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 E7ESA3 106 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 J3KR12 359 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 SUN1O94901 812 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 NFATC1O95644 943 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 AP2A1O95782 977 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 PENKP01210 267 aaPredicted RBP8.77□□□□□ -1.01
TRAF3-209ENST00000560463 TSHRP16473 764 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 NFKB1P19838 968 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 CD68P34810 354 aaPredicted RBP8.77□□□□□ -1.01
TRAF3-209ENST00000560463 ACVRL1P37023 503 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 MMP13P45452 471 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 GEMP55040 296 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 SLC20A2Q08357 652 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 GPS2Q13227 327 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 MPP3Q13368 585 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 DMC1Q14565 340 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 ZNF235Q14590 738 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 LBRQ14739 615 aaKnown RBP8.77□□□□□ -1.01
TRAF3-209ENST00000560463 KCTD19Q17RG1 926 aaPredicted RBP8.77□□□□□ -1.01
TRAF3-209ENST00000560463 INO80DQ53TQ3 878 aaPredicted RBP8.77□□□□□ -1.01
TRAF3-209ENST00000560463 FAM78AQ5JUQ0 283 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 ANKRD22Q5VYY1 191 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 ALG1LQ6GMV1 187 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 LRRC8BQ6P9F7 803 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 POTEHQ6S545 545 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 TPGS1Q6ZTW0 290 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 GET4Q7L5D6 327 aaPredicted RBP8.77□□□□□ -1.01
TRAF3-209ENST00000560463 LINC00523Q86TU6 105 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 CCDC25Q86WR0 208 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 OR7D4Q8NG98 312 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 UBLCP1Q8WVY7 318 aaPredicted RBP8.77□□□□□ -1.01
TRAF3-209ENST00000560463 MSLNLQ96KJ4 702 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 GDAP1L1Q96MZ0 367 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 SLC25A51Q9H1U9 297 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 LRRC40Q9H9A6 602 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 GLOD4Q9HC38 313 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 VPS45Q9NRW7 570 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 ZNF446Q9NWS9 450 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 THG1LQ9NWX6 298 aaKnown RBP8.77□□□□□ -1.01
TRAF3-209ENST00000560463 CLDND1Q9NY35 253 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 COLQQ9Y215 455 aaPredicted RBP8.77□□□□□ -1.01
TRAF3-209ENST00000560463 OR51B4Q9Y5P0 310 aa8.77□□□□□ -1.01
TRAF3-209ENST00000560463 SZT2Q5T011 3432 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms