RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 KCTD6Q8NC69 237 aa14.29□□□□□ -0.12
PKNOX1-209ENST00000560448 HMGB4Q8WW32 186 aa14.29□□□□□ -0.12
PKNOX1-209ENST00000560448 TSC1Q92574 1164 aa14.29□□□□□ -0.12
PKNOX1-209ENST00000560448 PRCCQ92733 491 aaPredicted RBP14.29□□□□□ -0.12
PKNOX1-209ENST00000560448 FAF2Q96CS3 445 aa14.29□□□□□ -0.12
PKNOX1-209ENST00000560448 MRGPRX1Q96LB2 322 aa14.29□□□□□ -0.12
PKNOX1-209ENST00000560448 SPON2Q9BUD6 331 aa14.29□□□□□ -0.12
PKNOX1-209ENST00000560448 RSPH9Q9H1X1 276 aaPredicted RBP14.29□□□□□ -0.12
PKNOX1-209ENST00000560448 LRRC19Q9H756 370 aa14.29□□□□□ -0.12
PKNOX1-209ENST00000560448 PRSS16Q9NQE7 514 aa14.29□□□□□ -0.12
PKNOX1-209ENST00000560448 NDFIP2Q9NV92 336 aa14.29□□□□□ -0.12
PKNOX1-209ENST00000560448 MRFAP1Q9Y605 127 aa14.29□□□□□ -0.12
PKNOX1-209ENST00000560448 ALG6Q9Y672 507 aa14.29□□□□□ -0.12
PKNOX1-209ENST00000560448 DUSP10Q9Y6W6 482 aa14.29□□□□□ -0.12
PKNOX1-209ENST00000560448 DCLK1O15075 740 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 RPP40O75818 363 aaKnown RBP14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 ZMPSTE24O75844 475 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 IGLV3-19P01714 112 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 TCF4P15884 667 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 COMTP21964 271 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 PLA2G5P39877 138 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 WASP42768 502 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 FNTBP49356 437 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 SERINC3Q13530 473 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 RFTN1Q14699 578 aaPredicted RBP14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 TTC31Q49AM3 519 aaPredicted RBP14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 ZFYVE27Q5T4F4 411 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 DAB2IPQ5VWQ8 1189 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 AFMIDQ63HM1 303 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 ZNF776Q68DI1 518 aaPredicted RBP14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 KIAA1211LQ6NV74 962 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 SLC36A4Q6YBV0 504 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 DAAM2Q86T65 1068 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 KBTBD6Q86V97 674 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 TMPRSS6Q8IU80 811 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 PGBD3Q8N328 593 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 PCDH20Q8N6Y1 951 aaKnown RBP14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 OR7D4Q8NG98 312 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 TPCN2Q8NHX9 752 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 FRS2Q8WU20 508 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 FAM122AQ96E09 287 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 SIPA1Q96FS4 1042 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 RPL10LQ96L21 214 aaKnown RBP14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 MAGEB5Q9BZ81 275 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 ZDHHC4Q9NPG8 344 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 PLXND1Q9Y4D7 1925 aa14.28□□□□□ -0.12
PKNOX1-209ENST00000560448 CTAGE9A4FU28 777 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 ANTXRLA6NF34 631 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 TMEM110-MUSTN1A8MSY1 372 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 RASA4BC9J798 803 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 RASA4O43374 803 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 ADH1BP00325 375 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 DNTTP04053 509 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 ACADMP11310 421 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 SRCP12931 536 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 ZFXP17010 805 aaPredicted RBP14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 NDUFV2P19404 249 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 OXTRP30559 389 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 P2RY2P41231 377 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 CTSOP43234 321 aaPredicted RBP14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 RECQLP46063 649 aaPredicted RBP14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 COPAP53621 1224 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 NAP1L1P55209 391 aaKnown RBP14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 ARF5P84085 180 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 CCDC15Q0P6D6 951 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 TUBB2AQ13885 445 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 DPYSL3Q14195 570 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 DLG2Q15700 870 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 C9orf64Q5T6V5 341 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 FAM46CQ5VWP2 391 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 TXNRD3NBQ6F5E7 133 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 USP30Q70CQ3 517 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 OR8D1Q8WZ84 308 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 PTPRN2Q92932 1015 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 LRIG1Q96JA1 1093 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 LOXL4Q96JB6 756 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 ZC3H10Q96K80 434 aaKnown RBP14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 NAPGQ99747 312 aaPredicted RBP14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 TUBB2BQ9BVA1 445 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 CALN1Q9BXU9 219 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 MKRN2Q9H000 416 aaKnown RBP14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 NOL6Q9H6R4 1146 aaKnown RBP14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 SLCO3A1Q9UIG8 710 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 RAB23Q9ULC3 237 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 TPX2Q9ULW0 747 aaKnown RBP14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 RAD54BQ9Y620 910 aa14.27□□□□□ -0.12
PKNOX1-209ENST00000560448 MUC6Q6W4X9 2439 aa14.26□□□□□ -0.13
PKNOX1-209ENST00000560448 CCDC66A2RUB6 948 aa14.26□□□□□ -0.13
PKNOX1-209ENST00000560448 C1QTNF3-AMACRE9PGA6 284 aa14.26□□□□□ -0.13
PKNOX1-209ENST00000560448 MCF2LO15068 1137 aa14.26□□□□□ -0.13
PKNOX1-209ENST00000560448 SNAP91O60641 907 aa14.26□□□□□ -0.13
PKNOX1-209ENST00000560448 KDELR1P24390 212 aa14.26□□□□□ -0.13
PKNOX1-209ENST00000560448 ACVRL1P37023 503 aa14.26□□□□□ -0.13
PKNOX1-209ENST00000560448 DPP6P42658 865 aa14.26□□□□□ -0.13
PKNOX1-209ENST00000560448 TAS2R40P59535 323 aa14.26□□□□□ -0.13
PKNOX1-209ENST00000560448 IL10RBQ08334 325 aa14.26□□□□□ -0.13
PKNOX1-209ENST00000560448 ACCSLQ4AC99 568 aa14.26□□□□□ -0.13
PKNOX1-209ENST00000560448 ANKRD20A8PQ5CZ79 823 aa14.26□□□□□ -0.13
PKNOX1-209ENST00000560448 HEATR6Q6AI08 1181 aaKnown RBP14.26□□□□□ -0.13
PKNOX1-209ENST00000560448 C22orf39Q6P5X5 142 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms