RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 IL12RB2Q99665 862 aa10.84□□□□□ -0.67
CRTC3-209ENST00000560320 TMEM109Q9BVC6 243 aa10.84□□□□□ -0.67
CRTC3-209ENST00000560320 CEP41Q9BYV8 373 aa10.84□□□□□ -0.67
CRTC3-209ENST00000560320 LRRC40Q9H9A6 602 aa10.84□□□□□ -0.67
CRTC3-209ENST00000560320 CERS4Q9HA82 394 aa10.84□□□□□ -0.67
CRTC3-209ENST00000560320 TMBIM4Q9HC24 238 aa10.84□□□□□ -0.67
CRTC3-209ENST00000560320 NDFIP2Q9NV92 336 aa10.84□□□□□ -0.67
CRTC3-209ENST00000560320 DZANK1Q9NVP4 752 aa10.84□□□□□ -0.67
CRTC3-209ENST00000560320 CFAP97Q9P2B7 532 aa10.84□□□□□ -0.67
CRTC3-209ENST00000560320 NFS1Q9Y697 457 aa10.84□□□□□ -0.67
CRTC3-209ENST00000560320 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.84□□□□□ -0.67
CRTC3-209ENST00000560320 NUP210Q8TEM1 1887 aaPredicted RBP10.84□□□□□ -0.67
CRTC3-209ENST00000560320 C5orf42Q9H799 3197 aa10.84□□□□□ -0.67
CRTC3-209ENST00000560320 MYO9BQ13459 2157 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 CCDC195A0A1B0GUA6 201 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 ILVBLA1L0T0 632 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 F5H423 210 aaPredicted RBP10.83□□□□□ -0.68
CRTC3-209ENST00000560320 H0Y626 953 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 H3BQF6 201 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 TRDMT1O14717 391 aaKnown RBP10.83□□□□□ -0.68
CRTC3-209ENST00000560320 PER2O15055 1255 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 POLR3GO15318 223 aaPredicted RBP10.83□□□□□ -0.68
CRTC3-209ENST00000560320 RGS16O15492 202 aaPredicted RBP10.83□□□□□ -0.68
CRTC3-209ENST00000560320 AP2A1O95782 977 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 KLKB1P03952 638 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 GJA1P17302 382 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 ELK3P41970 407 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 IRAK1P51617 712 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 RPS24P62847 133 aaKnown RBP10.83□□□□□ -0.68
CRTC3-209ENST00000560320 ITKQ08881 620 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 ZBTB17Q13105 803 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 CBLBQ13191 982 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 SERINC3Q13530 473 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 CAMK1Q14012 370 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 ZNF235Q14590 738 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 GRIN2CQ14957 1233 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 TEAD2Q15562 447 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 DUSP6Q16828 381 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 HP1BP3Q5SSJ5 553 aaPredicted RBP10.83□□□□□ -0.68
CRTC3-209ENST00000560320 LRRC8BQ6P9F7 803 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 ZNF783Q6ZMS7 281 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 ARHGAP36Q6ZRI8 547 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 HTR3DQ70Z44 454 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 CPXM2Q8N436 756 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 RIBC1Q8N443 379 aaPredicted RBP10.83□□□□□ -0.68
CRTC3-209ENST00000560320 CARNMT1Q8N4J0 409 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 PDCD7Q8N8D1 485 aaKnown RBP10.83□□□□□ -0.68
CRTC3-209ENST00000560320 FAM76AQ8TAV0 307 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 SMG7Q92540 1137 aaKnown RBP10.83□□□□□ -0.68
CRTC3-209ENST00000560320 MAML1Q92585 1016 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 ZBTB9Q96C00 473 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 ZFRQ96KR1 1074 aaKnown RBP10.83□□□□□ -0.68
CRTC3-209ENST00000560320 ATP6V1G3Q96LB4 118 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 ZNF599Q96NL3 588 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 FCRL5Q96RD9 977 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 SLC22A12Q96S37 553 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 NAT9Q9BTE0 207 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 SPON2Q9BUD6 331 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 PBX4Q9BYU1 374 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 MUC3BQ9H195 1237 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 NOL6Q9H6R4 1146 aaKnown RBP10.83□□□□□ -0.68
CRTC3-209ENST00000560320 GLOD4Q9HC38 313 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 C11orf16Q9NQ32 467 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 HCFC1R1Q9NWW0 138 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 BFARQ9NZS9 450 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 SAMD15Q9P1V8 674 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 VPS18Q9P253 973 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 DNMT3BQ9UBC3 853 aaKnown RBP10.83□□□□□ -0.68
CRTC3-209ENST00000560320 STOML2Q9UJZ1 356 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 ARHGAP26Q9UNA1 814 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 CHMP2BQ9UQN3 213 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 CHD9Q3L8U1 2897 aa10.83□□□□□ -0.68
CRTC3-209ENST00000560320 NOTCH4Q99466 2003 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 EXOC1LA0A1B0GW35 172 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 E2F8A0AVK6 867 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 SDR42E2A6NKP2 422 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 SMIM23A6NLE4 172 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 LEFTY2O00292 366 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 PRAMEF11O60813 436 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 SHBGP04278 402 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 STX2P32856 288 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 PBX2P40425 430 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 MMP13P45452 471 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 IFNAR2P48551 515 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 NRIP1P48552 1158 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 NPY2RP49146 381 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 CBX1P83916 185 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 GAD2Q05329 585 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 CDH18Q13634 790 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 LBRQ14739 615 aaKnown RBP10.82□□□□□ -0.68
CRTC3-209ENST00000560320 SKIDA1Q1XH10 827 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 KLHL38Q2WGJ6 581 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 MPPE1Q53F39 396 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 ARTNQ5T4W7 220 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 CASC4Q6P4E1 433 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 Q6ZNB5 142 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 CAPN12Q6ZSI9 719 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 C3orf62Q6ZUJ4 267 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 SPRED2Q7Z698 418 aa10.82□□□□□ -0.68
CRTC3-209ENST00000560320 GRASPQ7Z6J2 395 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms