RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 PAPOLAP51003 745 aaKnown RBP20.72■□□□□ 0.91
TSPAN3-207ENST00000559494 NHLH1Q02575 133 aa20.72■□□□□ 0.91
TSPAN3-207ENST00000559494 ANKRD20A8PQ5CZ79 823 aa20.72■□□□□ 0.91
TSPAN3-207ENST00000559494 LEKR1Q6ZMV7 388 aa20.72■□□□□ 0.91
TSPAN3-207ENST00000559494 LZTR1Q8N653 840 aa20.72■□□□□ 0.91
TSPAN3-207ENST00000559494 LRRC57Q8N9N7 239 aa20.72■□□□□ 0.91
TSPAN3-207ENST00000559494 FAF2Q96CS3 445 aa20.72■□□□□ 0.91
TSPAN3-207ENST00000559494 FAM129BQ96TA1 746 aa20.72■□□□□ 0.91
TSPAN3-207ENST00000559494 ZNF670Q9BS34 389 aa20.72■□□□□ 0.91
TSPAN3-207ENST00000559494 PRDM16Q9HAZ2 1276 aa20.72■□□□□ 0.91
TSPAN3-207ENST00000559494 INVSQ9Y283 1065 aa20.72■□□□□ 0.91
TSPAN3-207ENST00000559494 GON4LQ3T8J9 2241 aa20.72■□□□□ 0.91
TSPAN3-207ENST00000559494 CXorf51AA0A1B0GTR3 108 aa20.71■□□□□ 0.91
TSPAN3-207ENST00000559494 MACROD2A1Z1Q3 448 aa20.71■□□□□ 0.91
TSPAN3-207ENST00000559494 LRRD1A4D1F6 860 aa20.71■□□□□ 0.91
TSPAN3-207ENST00000559494 ZNF821O75541 412 aaPredicted RBP20.71■□□□□ 0.91
TSPAN3-207ENST00000559494 C7P10643 843 aa20.71■□□□□ 0.91
TSPAN3-207ENST00000559494 NBL1P41271 181 aa20.71■□□□□ 0.91
TSPAN3-207ENST00000559494 TMCO3Q6UWJ1 677 aa20.71■□□□□ 0.91
TSPAN3-207ENST00000559494 ZNF354CQ86Y25 554 aa20.71■□□□□ 0.91
TSPAN3-207ENST00000559494 STK40Q8N2I9 435 aa20.71■□□□□ 0.91
TSPAN3-207ENST00000559494 KIAA1524Q8TCG1 905 aa20.71■□□□□ 0.91
TSPAN3-207ENST00000559494 RLN3Q8WXF3 142 aa20.71■□□□□ 0.91
TSPAN3-207ENST00000559494 DDX56Q9NY93 547 aaKnown RBP20.71■□□□□ 0.91
TSPAN3-207ENST00000559494 GPR179Q6PRD1 2367 aa20.7■□□□□ 0.91
TSPAN3-207ENST00000559494 ARHGAP42A6NI28 874 aa20.7■□□□□ 0.9
TSPAN3-207ENST00000559494 J3KR12 359 aa20.7■□□□□ 0.9
TSPAN3-207ENST00000559494 PSTPIP1O43586 416 aa20.7■□□□□ 0.9
TSPAN3-207ENST00000559494 CNR2P34972 360 aa20.7■□□□□ 0.9
TSPAN3-207ENST00000559494 SERPINH1P50454 418 aaKnown RBP20.7■□□□□ 0.9
TSPAN3-207ENST00000559494 CLCN6P51797 869 aa20.7■□□□□ 0.9
TSPAN3-207ENST00000559494 RPS14P62263 151 aaKnown RBP20.7■□□□□ 0.9
TSPAN3-207ENST00000559494 USP39Q53GS9 565 aaKnown RBP20.7■□□□□ 0.9
TSPAN3-207ENST00000559494 ZC3H14Q6PJT7 736 aaKnown RBP20.7■□□□□ 0.9
TSPAN3-207ENST00000559494 KIAA1324Q6UXG2 1013 aaKnown RBP20.7■□□□□ 0.9
TSPAN3-207ENST00000559494 Q6ZVU0 165 aa20.7■□□□□ 0.9
TSPAN3-207ENST00000559494 PQLC3Q8N755 202 aa20.7■□□□□ 0.9
TSPAN3-207ENST00000559494 FRMD1Q8N878 549 aa20.7■□□□□ 0.9
TSPAN3-207ENST00000559494 KRT35Q92764 455 aa20.7■□□□□ 0.9
TSPAN3-207ENST00000559494 RNF25Q96BH1 459 aaPredicted RBP20.7■□□□□ 0.9
TSPAN3-207ENST00000559494 SIPA1Q96FS4 1042 aa20.7■□□□□ 0.9
TSPAN3-207ENST00000559494 RNF157Q96PX1 679 aa20.7■□□□□ 0.9
TSPAN3-207ENST00000559494 PHOX2BQ99453 314 aa20.7■□□□□ 0.9
TSPAN3-207ENST00000559494 RSPH9Q9H1X1 276 aaPredicted RBP20.7■□□□□ 0.9
TSPAN3-207ENST00000559494 FCF1Q9Y324 198 aaKnown RBP20.7■□□□□ 0.9
TSPAN3-207ENST00000559494 SPAG17Q6Q759 2223 aa20.69■□□□□ 0.9
TSPAN3-207ENST00000559494 NRDCO43847 1150 aa20.69■□□□□ 0.9
TSPAN3-207ENST00000559494 KRT1P04264 644 aa20.69■□□□□ 0.9
TSPAN3-207ENST00000559494 MARCKSL1P49006 195 aa20.69■□□□□ 0.9
TSPAN3-207ENST00000559494 MAP7D1Q3KQU3 841 aa20.69■□□□□ 0.9
TSPAN3-207ENST00000559494 NCBP2-AS2Q69YL0 99 aa20.69■□□□□ 0.9
TSPAN3-207ENST00000559494 ARHGAP36Q6ZRI8 547 aa20.69■□□□□ 0.9
TSPAN3-207ENST00000559494 METTL3Q86U44 580 aaKnown RBP20.69■□□□□ 0.9
TSPAN3-207ENST00000559494 GAB3Q8WWW8 586 aa20.69■□□□□ 0.9
TSPAN3-207ENST00000559494 ZNF830Q96NB3 372 aaPredicted RBP20.69■□□□□ 0.9
TSPAN3-207ENST00000559494 FBRSQ9HAH7 460 aa20.69■□□□□ 0.9
TSPAN3-207ENST00000559494 CD93Q9NPY3 652 aa20.69■□□□□ 0.9
TSPAN3-207ENST00000559494 NYNRINQ9P2P1 1898 aaKnown RBP20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 NUMA1Q14980 2115 aa20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 ZSCAN5CA6NGD5 496 aaPredicted RBP20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 ZNF487B1APH4 448 aa20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 DFFAO00273 331 aa20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 PRAMEF11O60813 436 aa20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 PALMO75781 387 aa20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 RPP40O75818 363 aaKnown RBP20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 CCDC175P0C221 793 aa20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 P2RY2P41231 377 aa20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 GEMIN4P57678 1058 aaKnown RBP20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 PAFAH1B3Q15102 231 aaKnown RBP20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 IFI16Q16666 785 aaKnown RBP20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 C22orf39Q6P5X5 142 aa20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 MFSD7Q6UXD7 560 aa20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 ZNF662Q6ZS27 426 aa20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 VSIG1Q86XK7 387 aa20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 CACUL1Q86Y37 369 aa20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 RNF10Q8N5U6 811 aaKnown RBP20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 OR2A12Q8NGT7 310 aa20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 PRCCQ92733 491 aaPredicted RBP20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 CEP44Q9C0F1 390 aa20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 TNKS2Q9H2K2 1166 aa20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 KCNF1Q9H3M0 494 aa20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 PDFQ9HBH1 243 aa20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 ITM2CQ9NQX7 267 aa20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 GUCA1BQ9UMX6 200 aa20.68■□□□□ 0.9
TSPAN3-207ENST00000559494 MCF2LO15068 1137 aa20.67■□□□□ 0.9
TSPAN3-207ENST00000559494 BNIP3LO60238 219 aa20.67■□□□□ 0.9
TSPAN3-207ENST00000559494 PTMAP06454 111 aaKnown RBP20.67■□□□□ 0.9
TSPAN3-207ENST00000559494 CYTH1Q15438 398 aa20.67■□□□□ 0.9
TSPAN3-207ENST00000559494 TAZQ16635 292 aa20.67■□□□□ 0.9
TSPAN3-207ENST00000559494 INO80DQ53TQ3 878 aaPredicted RBP20.67■□□□□ 0.9
TSPAN3-207ENST00000559494 NT5DC3Q86UY8 548 aa20.67■□□□□ 0.9
TSPAN3-207ENST00000559494 MMAAQ8IVH4 418 aaKnown RBP20.67■□□□□ 0.9
TSPAN3-207ENST00000559494 KATNAL2Q8IYT4 538 aa20.67■□□□□ 0.9
TSPAN3-207ENST00000559494 FAM160A2Q8N612 972 aaPredicted RBP20.67■□□□□ 0.9
TSPAN3-207ENST00000559494 PCDH20Q8N6Y1 951 aaKnown RBP20.67■□□□□ 0.9
TSPAN3-207ENST00000559494 ISG20Q96AZ6 181 aaKnown RBP20.67■□□□□ 0.9
TSPAN3-207ENST00000559494 TSGA10Q9BZW7 698 aa20.67■□□□□ 0.9
TSPAN3-207ENST00000559494 USP36Q9P275 1121 aaKnown RBP20.67■□□□□ 0.9
TSPAN3-207ENST00000559494 IPO11Q9UI26 975 aaKnown RBP20.67■□□□□ 0.9
TSPAN3-207ENST00000559494 PCDHA3Q9Y5H8 950 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms