RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 SLC39A8Q9C0K1 460 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 MUC3BQ9H195 1237 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 TNKS2Q9H2K2 1166 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 PABPC3Q9H361 631 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 PDFQ9HBH1 243 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 TMEM51Q9NW97 253 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 FCF1Q9Y324 198 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 WASF2Q9Y6W5 498 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 EDDM13A0A1B0GTR0 161 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 A0A1W2PP55 124 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 LNP1A1A4G5 178 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 J3KR12 359 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 SPINT1O43278 529 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 ZNF217O75362 1048 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 LCA5LO95447 670 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 PEX11BO96011 259 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 MYBL1P10243 752 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 EPHB2P29323 1055 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 PCK1P35558 622 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 RGRP47804 291 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 DHPSP49366 369 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 RPL6Q02878 288 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 MMRN1Q13201 1228 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 IHHQ14623 411 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 CYTH1Q15438 398 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 DPYSL2Q16555 572 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 POM121L1PQ3SYA9 428 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 SPDYCQ5MJ68 293 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 LRRC31Q6UY01 552 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 DPY19L3Q6ZPD9 716 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 LPCAT2Q7L5N7 544 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 POLNQ7Z5Q5 900 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 UMODL1-AS1Q8N2C9 162 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 OR2I1PQ8NGU4 316 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 DNASE2BQ8WZ79 361 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 PRCCQ92733 491 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 MRFAP1L1Q96HT8 127 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 CELF6Q96J87 481 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 HSPA12BQ96MM6 686 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 SPON2Q9BUD6 331 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 DHX35Q9H5Z1 703 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 CAPN10Q9HC96 672 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 DLL3Q9NYJ7 618 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 SUN2Q9UH99 717 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 ANAPC7Q9UJX3 599 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 PAXBP1Q9Y5B6 917 aa12.92□□□□□ -0.34
RABGGTA-207ENST00000558936 METTL12A8MUP2 240 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 PRR5-ARHGAP8B1AHC4 643 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 RASA4BC9J798 803 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 AKR1B15C9JRZ8 316 aaPredicted RBP12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 CBX4O00257 560 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 MCF2LO15068 1137 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 MUSKO15146 869 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 INSIG1O15503 277 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 RASA4O43374 803 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 KDELR3O43731 214 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 ERCC2P18074 760 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 AMPD1P23109 780 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 SLC8A1P32418 973 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 ID4P47928 161 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 MAPKAPK2P49137 400 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 SERPINH1P50454 418 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 ARHGAP8P85298 464 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 LMNB2Q03252 620 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 SULT2A1Q06520 285 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 TRIM14Q14142 442 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 RSPO4Q2I0M5 234 aaPredicted RBP12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 ARL13BQ3SXY8 428 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 C6orf118Q5T5N4 469 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 PIP5KL1Q5T9C9 394 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 AGBL4Q5VU57 503 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 C22orf39Q6P5X5 142 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 RAD9BQ6WBX8 426 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 SLC36A4Q6YBV0 504 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 ZNF783Q6ZMS7 281 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 RFX8Q6ZV50 586 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 PIGKQ92643 395 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 GOLPH3Q9H4A6 298 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 PCDH18Q9HCL0 1135 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 ATP13A1Q9HD20 1204 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 VPS45Q9NRW7 570 aa12.91□□□□□ -0.34
RABGGTA-207ENST00000558936 WDFY3Q8IZQ1 3526 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 SOWAHDA6NJG2 315 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 C3orf70A6NLC5 250 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 MTA2O94776 668 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 MOCS3O95396 460 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 TMEM253P0C7T8 217 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 PSMD8P48556 350 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 AIF1P55008 147 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 ST8SIA6P61647 398 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 PPP2CBP62714 309 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 PPP2CAP67775 309 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 CNTN1Q12860 1018 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 SERINC3Q13530 473 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 EFHC2Q5JST6 749 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 ACBD5Q5T8D3 534 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 DCAF12L1Q5VU92 463 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 ZNF776Q68DI1 518 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 PPP1R2P3Q6NXS1 205 aa12.9□□□□□ -0.34
RABGGTA-207ENST00000558936 LAYNQ6UX15 382 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms