RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 NIPA2Q8N8Q9 360 aa14.14□□□□□ -0.15
TSPAN3-205ENST00000558745 DCAF4L2Q8NA75 395 aa14.14□□□□□ -0.15
TSPAN3-205ENST00000558745 CHST14Q8NCH0 376 aa14.14□□□□□ -0.15
TSPAN3-205ENST00000558745 HMCESQ96FZ2 354 aa14.14□□□□□ -0.15
TSPAN3-205ENST00000558745 GPR174Q9BXC1 333 aa14.14□□□□□ -0.15
TSPAN3-205ENST00000558745 SLC39A8Q9C0K1 460 aa14.14□□□□□ -0.15
TSPAN3-205ENST00000558745 TMEM74BQ9NUR3 256 aa14.14□□□□□ -0.15
TSPAN3-205ENST00000558745 ETNK2Q9NVF9 386 aa14.14□□□□□ -0.15
TSPAN3-205ENST00000558745 SERGEFQ9UGK8 458 aa14.14□□□□□ -0.15
TSPAN3-205ENST00000558745 SARDHQ9UL12 918 aa14.14□□□□□ -0.15
TSPAN3-205ENST00000558745 HS3ST2Q9Y278 367 aa14.14□□□□□ -0.15
TSPAN3-205ENST00000558745 HYOU1Q9Y4L1 999 aa14.14□□□□□ -0.15
TSPAN3-205ENST00000558745 NUP205Q92621 2012 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 NCOR2Q9Y618 2525 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 DMXL1Q9Y485 3027 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 ZNF292O60281 2723 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 ATXN2Q99700 1313 aaKnown RBP14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 WASH4PA8MWX3 477 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 PATE3B3GLJ2 98 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 RASA4BC9J798 803 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 RASA4O43374 803 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 IL1BP01584 269 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 DNTTP04053 509 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 ITPKAP23677 461 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 SLC8A1P32418 973 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 DNA2P51530 1060 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 MMRN1Q13201 1228 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 SF3A2Q15428 464 aaKnown RBP14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 CST6Q15828 149 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 BOLA3Q53S33 107 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 ZNF776Q68DI1 518 aaPredicted RBP14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 TCEAL6Q6IPX3 200 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 RAD9BQ6WBX8 426 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 ZNF783Q6ZMS7 281 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 LPCAT2Q7L5N7 544 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 GANCQ8TET4 914 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 PIGKQ92643 395 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 TCEAL3Q969E4 200 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 PANX2Q96RD6 677 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 MAGEH1Q9H213 219 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 NEUROG2Q9H2A3 272 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 CATSPERBQ9H7T0 1116 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 KLHL11Q9NVR0 708 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 UVRAGQ9P2Y5 699 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 PCDHA13Q9Y5I0 950 aa14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.13□□□□□ -0.15
TSPAN3-205ENST00000558745 WDR87Q6ZQQ6 2873 aa14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 A0A1W2PP55 124 aa14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 BCLAF3A2AJT9 711 aaKnown RBP14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 BUB1O43683 1085 aa14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 KDELR3O43731 214 aa14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 NDUFS2O75306 463 aa14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 CTSLP07711 333 aa14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 GKP32189 559 aa14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 VASPP50552 380 aaPredicted RBP14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 ZNF33AQ06730 810 aa14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 RETSATQ6NUM9 610 aa14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 ARHGAP36Q6ZRI8 547 aa14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 POLNQ7Z5Q5 900 aa14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 UMODL1-AS1Q8N2C9 162 aa14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 AADATQ8N5Z0 425 aa14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 NPWQ8N729 165 aa14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 OR2A12Q8NGT7 310 aa14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 PABPC3Q9H361 631 aaKnown RBP14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 C6orf106Q9H6K1 298 aaPredicted RBP14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 LRRC19Q9H756 370 aa14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 PCDH18Q9HCL0 1135 aa14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 SEMA4GQ9NTN9 838 aa14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 FBXL12Q9NXK8 326 aa14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 EPN1Q9Y6I3 576 aaPredicted RBP14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 BAHCC1Q9P281 2608 aa14.12□□□□□ -0.15
TSPAN3-205ENST00000558745 RALGAPA1Q6GYQ0 2036 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 ACACBO00763 2458 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 RCCD1A6NED2 376 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 FAM47DPA6NHR8 397 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 J3KR12 359 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 FGF10O15520 208 aaPredicted RBP14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 RNASEH1O60930 286 aaKnown RBP14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 RNASEH2AO75792 299 aaKnown RBP14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 LCA5LO95447 670 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 IL4RP24394 825 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 MPLP40238 635 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 SERPINH1P50454 418 aaKnown RBP14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 PAPOLAP51003 745 aaKnown RBP14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 CDH6P55285 790 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 DPYSQ14117 519 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 DPYSL2Q16555 572 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 C22orf39Q6P5X5 142 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 SLC36A4Q6YBV0 504 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 DPY19L3Q6ZPD9 716 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 C11orf74Q86VG3 221 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 PSTKQ8IV42 348 aaKnown RBP14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 ARHGAP12Q8IWW6 846 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 HDDC3Q8N4P3 179 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 OR6K2Q8NGY2 324 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 PIP4K2CQ8TBX8 421 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 OR8D1Q8WZ84 308 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 ZNF419Q96HQ0 510 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms