RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 HS3ST2Q9Y278 367 aa9□□□□□ -0.97
SNRPA1-206ENST00000558059 NCKAP1Q9Y2A7 1128 aa9□□□□□ -0.97
SNRPA1-206ENST00000558059 FRYQ5TBA9 3013 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 GOLGA4Q13439 2230 aaKnown RBP8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 UPK3BL1B0FP48 263 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 UPK3BL2E5RIL1 263 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 K7ERQ8 282 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 MCF2LO15068 1137 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 SMAD6O43541 496 aaKnown RBP8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 OPHN1O60890 802 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 RNASEH2AO75792 299 aaKnown RBP8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 FSBPO95073 299 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 ADH1BP00325 375 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 SERPINC1P01008 464 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 IL1BP01584 269 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 PLEKP08567 350 aaPredicted RBP8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 CD59P13987 128 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 GOT1P17174 413 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 RRM1P23921 792 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 CD27P26842 260 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 DRD3P35462 400 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 PBX1P40424 430 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 PRKCIP41743 596 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 NOVA1P51513 510 aaKnown RBP8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 ZNF143P52747 638 aaPredicted RBP8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 ATXN3P54252 364 aaPredicted RBP8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 KRT83P78385 493 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 FANCCQ00597 558 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 OGDHQ02218 1023 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 SCAPQ12770 1279 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 SFSWAPQ12872 951 aaKnown RBP8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 ASIC2Q16515 512 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 ARL13BQ3SXY8 428 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 C6orf118Q5T5N4 469 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 KIAA0895LQ68EN5 471 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 NCEH1Q6PIU2 408 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 LINGO4Q6UY18 593 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 ZNF783Q6ZMS7 281 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 Q6ZVU0 165 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 ZNF571Q7Z3V5 609 aaPredicted RBP8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 NLRP14Q86W24 1093 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 DNAAF5Q86Y56 855 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 DCAF4L2Q8NA75 395 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 DEFB124Q8NES8 71 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 OR8D1Q8WZ84 308 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 SNX19Q92543 992 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 ZDHHC16Q969W1 377 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 NTAN1Q96AB6 310 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 FAM131CQ96AQ9 280 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 VCPIP1Q96JH7 1222 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 OMDQ99983 421 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 CNPY3Q9BT09 278 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 SPON2Q9BUD6 331 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 C2orf49Q9BVC5 232 aaPredicted RBP8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 ZDHHC5Q9C0B5 715 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 HAUS4Q9H6D7 363 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 RETREG1Q9H6L5 497 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 EBF2Q9HAK2 575 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 TM9SF3Q9HD45 589 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 OSGEPQ9NPF4 335 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 NDFIP2Q9NV92 336 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 PPM1HQ9ULR3 514 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 FZD4Q9ULV1 537 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 SPEGQ15772 3267 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 CACNA1BQ00975 2339 aa8.99□□□□□ -0.97
SNRPA1-206ENST00000558059 AKAP13Q12802 2813 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 A0A1B0GVT2 93 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 FAM47DPA6NHR8 397 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 LRRC72A6NJI9 287 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 GOLGA8CPA6NN73 597 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 TMCO5BA8MYB1 307 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 PLK4O00444 970 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 DDX3XO00571 662 aaKnown RBP eCLIP8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 ALOX15BO15296 676 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 CCP110O43303 1012 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 ZNF821O75541 412 aaPredicted RBP8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 LRIG2O94898 1065 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 CD160O95971 181 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 CTSLP07711 333 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 GZMAP12544 262 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 SKILP12757 684 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 CEACAM1P13688 526 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 RHOQP17081 205 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 PMLP29590 882 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 ACVRL1P37023 503 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 CSNK1EP49674 416 aaKnown RBP8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 ADPRHP54922 357 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 GNA12Q03113 381 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 SLC20A2Q08357 652 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 MAMLD1Q13495 774 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 ZSCAN23Q3MJ62 389 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 FIGNQ5HY92 759 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 SFMBT2Q5VUG0 894 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 PLEKHA7Q6IQ23 1121 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 RWDD4Q6NW29 188 aaKnown RBP8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 LRSAM1Q6UWE0 723 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 DSG4Q86SJ6 1040 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 DRC7Q8IY82 874 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 PYROXD2Q8N2H3 581 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms