RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 PRAMEF11O60813 436 aa21.7■■□□□ 1.06
CASC4-204ENST00000557945 HLA-EP13747 358 aa21.7■■□□□ 1.06
CASC4-204ENST00000557945 GARSP41250 739 aaKnown RBP21.7■■□□□ 1.06
CASC4-204ENST00000557945 MAGEA9P43362 315 aa21.7■■□□□ 1.06
CASC4-204ENST00000557945 NR2C2P49116 596 aa21.7■■□□□ 1.06
CASC4-204ENST00000557945 SLC20A2Q08357 652 aa21.7■■□□□ 1.06
CASC4-204ENST00000557945 GAS6Q14393 721 aa21.7■■□□□ 1.06
CASC4-204ENST00000557945 EOGTQ5NDL2 527 aa21.7■■□□□ 1.06
CASC4-204ENST00000557945 BZW1Q7L1Q6 419 aaKnown RBP21.7■■□□□ 1.06
CASC4-204ENST00000557945 LRRC49Q8IUZ0 686 aa21.7■■□□□ 1.06
CASC4-204ENST00000557945 SH2D3CQ8N5H7 860 aa21.7■■□□□ 1.06
CASC4-204ENST00000557945 ZNF366Q8N895 744 aa21.7■■□□□ 1.06
CASC4-204ENST00000557945 CCNYQ8ND76 341 aa21.7■■□□□ 1.06
CASC4-204ENST00000557945 UBA2Q9UBT2 640 aaPredicted RBP21.7■■□□□ 1.06
CASC4-204ENST00000557945 SLC8A2Q9UPR5 921 aa21.7■■□□□ 1.06
CASC4-204ENST00000557945 HS3ST2Q9Y278 367 aa21.7■■□□□ 1.06
CASC4-204ENST00000557945 RAD54BQ9Y620 910 aa21.7■■□□□ 1.06
CASC4-204ENST00000557945 MYO18AQ92614 2054 aaKnown RBP21.69■■□□□ 1.06
CASC4-204ENST00000557945 TTC34A8MYJ7 566 aa21.69■■□□□ 1.06
CASC4-204ENST00000557945 CHURC1-FNTBB4DL54 471 aa21.69■■□□□ 1.06
CASC4-204ENST00000557945 APOC4-APOC2K7ER74 178 aa21.69■■□□□ 1.06
CASC4-204ENST00000557945 K7ERQ8 282 aa21.69■■□□□ 1.06
CASC4-204ENST00000557945 SGK1O00141 431 aa21.69■■□□□ 1.06
CASC4-204ENST00000557945 APOC2P02655 101 aa21.69■■□□□ 1.06
CASC4-204ENST00000557945 EPHX1P07099 455 aa21.69■■□□□ 1.06
CASC4-204ENST00000557945 SRCP12931 536 aa21.69■■□□□ 1.06
CASC4-204ENST00000557945 PRKCHP24723 683 aa21.69■■□□□ 1.06
CASC4-204ENST00000557945 SERPINH1P50454 418 aaKnown RBP21.69■■□□□ 1.06
CASC4-204ENST00000557945 IL10RBQ08334 325 aa21.69■■□□□ 1.06
CASC4-204ENST00000557945 PDK1Q15118 436 aa21.69■■□□□ 1.06
CASC4-204ENST00000557945 ADAT2Q7Z6V5 191 aaKnown RBP21.69■■□□□ 1.06
CASC4-204ENST00000557945 SLC13A5Q86YT5 568 aaPredicted RBP21.69■■□□□ 1.06
CASC4-204ENST00000557945 KDM1BQ8NB78 822 aa21.69■■□□□ 1.06
CASC4-204ENST00000557945 LRRN4Q8WUT4 740 aa21.69■■□□□ 1.06
CASC4-204ENST00000557945 ERLEC1Q96DZ1 483 aa21.69■■□□□ 1.06
CASC4-204ENST00000557945 MYO19Q96H55 970 aa21.69■■□□□ 1.06
CASC4-204ENST00000557945 PBKQ96KB5 322 aa21.69■■□□□ 1.06
CASC4-204ENST00000557945 C16orf45Q96MC5 204 aaPredicted RBP21.69■■□□□ 1.06
CASC4-204ENST00000557945 TMEM245Q9H330 911 aa21.69■■□□□ 1.06
CASC4-204ENST00000557945 POLR3BQ9NW08 1133 aaPredicted RBP21.69■■□□□ 1.06
CASC4-204ENST00000557945 DLGAP2Q9P1A6 1054 aa21.69■■□□□ 1.06
CASC4-204ENST00000557945 MMP17Q9ULZ9 603 aa21.69■■□□□ 1.06
CASC4-204ENST00000557945 SNX12Q9UMY4 172 aa21.69■■□□□ 1.06
CASC4-204ENST00000557945 CHD5Q8TDI0 1954 aa21.69■■□□□ 1.06
CASC4-204ENST00000557945 PPP1R12AO14974 1030 aaPredicted RBP21.68■■□□□ 1.06
CASC4-204ENST00000557945 SMAD6O43541 496 aaKnown RBP21.68■■□□□ 1.06
CASC4-204ENST00000557945 MAFKO60675 156 aa21.68■■□□□ 1.06
CASC4-204ENST00000557945 ADAM23O75077 832 aa21.68■■□□□ 1.06
CASC4-204ENST00000557945 HOXB2P14652 356 aa21.68■■□□□ 1.06
CASC4-204ENST00000557945 ETF1P62495 437 aaKnown RBP21.68■■□□□ 1.06
CASC4-204ENST00000557945 MTAPQ13126 283 aa21.68■■□□□ 1.06
CASC4-204ENST00000557945 DLG2Q15700 870 aa21.68■■□□□ 1.06
CASC4-204ENST00000557945 SPEM1Q8N4L4 309 aa21.68■■□□□ 1.06
CASC4-204ENST00000557945 TMEM105Q8N8V8 129 aa21.68■■□□□ 1.06
CASC4-204ENST00000557945 NSMCE1Q8WV22 266 aa21.68■■□□□ 1.06
CASC4-204ENST00000557945 OSBPL9Q96SU4 736 aa21.68■■□□□ 1.06
CASC4-204ENST00000557945 MTG2Q9H4K7 406 aa21.68■■□□□ 1.06
CASC4-204ENST00000557945 PDFQ9HBH1 243 aa21.68■■□□□ 1.06
CASC4-204ENST00000557945 FCF1Q9Y324 198 aaKnown RBP21.68■■□□□ 1.06
CASC4-204ENST00000557945 TCRBV7S2A1N4TA0A589 114 aa21.67■■□□□ 1.06
CASC4-204ENST00000557945 ATP9BO43861 1147 aa21.67■■□□□ 1.06
CASC4-204ENST00000557945 SYNCRIPO60506 623 aaKnown RBP21.67■■□□□ 1.06
CASC4-204ENST00000557945 CD160O95971 181 aa21.67■■□□□ 1.06
CASC4-204ENST00000557945 CASQ1P31415 396 aa21.67■■□□□ 1.06
CASC4-204ENST00000557945 VASPP50552 380 aaPredicted RBP21.67■■□□□ 1.06
CASC4-204ENST00000557945 CLCN6P51797 869 aa21.67■■□□□ 1.06
CASC4-204ENST00000557945 OTUD4Q01804 1114 aaKnown RBP21.67■■□□□ 1.06
CASC4-204ENST00000557945 AP1B1Q10567 949 aa21.67■■□□□ 1.06
CASC4-204ENST00000557945 TIGD7Q6NT04 549 aaPredicted RBP21.67■■□□□ 1.06
CASC4-204ENST00000557945 SYT10Q6XYQ8 523 aa21.67■■□□□ 1.06
CASC4-204ENST00000557945 ZC3H18Q86VM9 953 aaKnown RBP21.67■■□□□ 1.06
CASC4-204ENST00000557945 ZSCAN30Q86W11 494 aa21.67■■□□□ 1.06
CASC4-204ENST00000557945 ACTL9Q8TC94 416 aa21.67■■□□□ 1.06
CASC4-204ENST00000557945 OLFM3Q96PB7 478 aa21.67■■□□□ 1.06
CASC4-204ENST00000557945 LGMNQ99538 433 aa21.67■■□□□ 1.06
CASC4-204ENST00000557945 GABRG3Q99928 467 aa21.67■■□□□ 1.06
CASC4-204ENST00000557945 IER2Q9BTL4 223 aa21.67■■□□□ 1.06
CASC4-204ENST00000557945 C11orf16Q9NQ32 467 aa21.67■■□□□ 1.06
CASC4-204ENST00000557945 SPATA6Q9NWH7 488 aaPredicted RBP21.67■■□□□ 1.06
CASC4-204ENST00000557945 SUN2Q9UH99 717 aa21.67■■□□□ 1.06
CASC4-204ENST00000557945 CXorf51AA0A1B0GTR3 108 aa21.66■■□□□ 1.06
CASC4-204ENST00000557945 DLL1O00548 723 aa21.66■■□□□ 1.06
CASC4-204ENST00000557945 BNIP3LO60238 219 aa21.66■■□□□ 1.06
CASC4-204ENST00000557945 TMCC1O94876 653 aa21.66■■□□□ 1.06
CASC4-204ENST00000557945 FGGP02679 453 aa21.66■■□□□ 1.06
CASC4-204ENST00000557945 DEKP35659 375 aaKnown RBP21.66■■□□□ 1.06
CASC4-204ENST00000557945 KLF1Q13351 362 aaPredicted RBP21.66■■□□□ 1.06
CASC4-204ENST00000557945 ENPP2Q13822 863 aa21.66■■□□□ 1.06
CASC4-204ENST00000557945 STARD3Q14849 445 aa21.66■■□□□ 1.06
CASC4-204ENST00000557945 LONRF2Q1L5Z9 754 aa21.66■■□□□ 1.06
CASC4-204ENST00000557945 TMEM31Q5JXX7 168 aa21.66■■□□□ 1.06
CASC4-204ENST00000557945 NYAP1Q6ZVC0 841 aa21.66■■□□□ 1.06
CASC4-204ENST00000557945 B4GALNT4Q76KP1 1039 aa21.66■■□□□ 1.06
CASC4-204ENST00000557945 SYT13Q7L8C5 426 aa21.66■■□□□ 1.06
CASC4-204ENST00000557945 CCDC13Q8IYE1 715 aa21.66■■□□□ 1.06
CASC4-204ENST00000557945 TTC13Q8NBP0 860 aa21.66■■□□□ 1.06
CASC4-204ENST00000557945 FRS2Q8WU20 508 aa21.66■■□□□ 1.06
CASC4-204ENST00000557945 CASKIN2Q8WXE0 1202 aa21.66■■□□□ 1.06
CASC4-204ENST00000557945 HDAC11Q96DB2 347 aa21.66■■□□□ 1.06
CASC4-204ENST00000557945 TSGA13Q96PP4 275 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms