RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 CEP170BQ9Y4F5 1589 aaPredicted RBP5.04□□□□□ -1.6
PRPF39-212ENST00000557477 ABCC1P33527 1531 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 SPAG9O60271 1321 aaKnown RBP5.03□□□□□ -1.6
PRPF39-212ENST00000557477 CLTCQ00610 1675 aaKnown RBP5.03□□□□□ -1.6
PRPF39-212ENST00000557477 SLC22A23A1A5C7 686 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 TNPO2O14787 897 aaKnown RBP5.03□□□□□ -1.6
PRPF39-212ENST00000557477 AKAP8O43823 692 aaKnown RBP5.03□□□□□ -1.6
PRPF39-212ENST00000557477 CCNT1O60563 726 aaKnown RBP5.03□□□□□ -1.6
PRPF39-212ENST00000557477 GUCY1B2O75343 617 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 TULP3O75386 442 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 RTN3O95197 1032 aaPredicted RBP5.03□□□□□ -1.6
PRPF39-212ENST00000557477 SGPL1O95470 568 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 F9P00740 461 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 PLAUP00749 431 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 IGLV2-14P01704 120 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 SLPIP03973 132 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 RPS6KB1P23443 525 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 TUBA4AP68366 448 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 RHAGQ02094 409 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 TSTQ16762 297 aaKnown RBP5.03□□□□□ -1.6
PRPF39-212ENST00000557477 HYIQ5T013 277 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 FAM69AQ5T7M9 428 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 MON1AQ86VX9 555 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 CHD1LQ86WJ1 897 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 UEVLDQ8IX04 471 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 BOLLQ8N9W6 283 aaKnown RBP5.03□□□□□ -1.6
PRPF39-212ENST00000557477 ZNF398Q8TD17 642 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 LBHD1Q9BQE6 289 aaPredicted RBP5.03□□□□□ -1.6
PRPF39-212ENST00000557477 USP44Q9H0E7 712 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 SLC25A18Q9H1K4 315 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 TMPRSS5Q9H3S3 457 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 SEMA4BQ9NPR2 832 aaPredicted RBP5.03□□□□□ -1.6
PRPF39-212ENST00000557477 ZDHHC7Q9NXF8 308 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 AASSQ9UDR5 926 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 MAFFQ9ULX9 164 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 PREX2Q70Z35 1606 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 REREQ9P2R6 1566 aa5.03□□□□□ -1.6
PRPF39-212ENST00000557477 AGLP35573 1532 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 SYCP2Q9BX26 1530 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 CCDC18Q5T9S5 1454 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 CXorf65A6NEN9 183 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 PER2O15055 1255 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 INPPL1O15357 1258 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 RNF8O76064 485 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 BAIAP3O94812 1187 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 GJC1P36383 396 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 PAFAH1B1P43034 410 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 PTPN9P43378 593 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 OAZ1P54368 228 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 CAMK1Q14012 370 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 FBXO43Q4G163 708 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 KIAA1755Q5JYT7 1200 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 WDR78Q5VTH9 848 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 NAA35Q5VZE5 725 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 GJB7Q6PEY0 223 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 DSTYKQ6XUX3 929 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 ZNF782Q6ZMW2 699 aaPredicted RBP5.02□□□□□ -1.61
PRPF39-212ENST00000557477 R3HCC1LQ7Z5L2 792 aaKnown RBP5.02□□□□□ -1.61
PRPF39-212ENST00000557477 KLBQ86Z14 1044 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 ARMC8Q8IUR7 673 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 TMEM217Q8N7C4 229 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 SCAIQ8N9R8 606 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 C8orf58Q8NAV2 365 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 OSR1Q8TAX0 266 aaPredicted RBP5.02□□□□□ -1.61
PRPF39-212ENST00000557477 NCSTNQ92542 709 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 MAP4K1Q92918 833 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 CHFRQ96EP1 664 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 C5orf34Q96MH7 638 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 CD180Q99467 661 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 MPHOSPH8Q99549 860 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 NPLQ9BXD5 320 aaPredicted RBP5.02□□□□□ -1.61
PRPF39-212ENST00000557477 R3HDMLQ9H3Y0 253 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 EPHX3Q9H6B9 360 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 TTC12Q9H892 705 aaPredicted RBP5.02□□□□□ -1.61
PRPF39-212ENST00000557477 ERVK-5Q9HDB9 667 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 OLA1Q9NTK5 396 aaKnown RBP5.02□□□□□ -1.61
PRPF39-212ENST00000557477 BEX4Q9NWD9 120 aaPredicted RBP5.02□□□□□ -1.61
PRPF39-212ENST00000557477 SLC25A10Q9UBX3 287 aaPredicted RBP5.02□□□□□ -1.61
PRPF39-212ENST00000557477 CAMK2AQ9UQM7 478 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 NAALADL1Q9UQQ1 740 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 NPATQ14207 1427 aa5.02□□□□□ -1.61
PRPF39-212ENST00000557477 MLH3Q9UHC1 1453 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 A0A1W2PPH5 198 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 MANSC4A6NHS7 340 aaPredicted RBP5.01□□□□□ -1.61
PRPF39-212ENST00000557477 LINC01548A6NM66 108 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 KCNJ18B7U540 433 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 URODP06132 367 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 MAN1A1P33908 653 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 GPD2P43304 727 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 CCR9P51686 369 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 CDH15P55291 814 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 PGM5Q15124 567 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 SLC18A3Q16572 532 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 ZNF766Q5HY98 468 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 ZNF667Q5HYK9 610 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 C10orf76Q5T2E6 689 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 CCDC30Q5VVM6 783 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 CLEC4GQ6UXB4 293 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 ZNF813Q6ZN06 617 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 ZNF366Q8N895 744 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms