RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 GUCY1A3Q02108 690 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 C2orf54Q08AI8 447 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 PTP4A2Q12974 167 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 MAMLD1Q13495 774 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 CUL1Q13616 776 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 ARHGEF6Q15052 776 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 ZBTB6Q15916 424 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 CNGA2Q16280 664 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 CCL14Q16627 93 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 FAM209AQ5JX71 171 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 LRRC38Q5VT99 294 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 NAA35Q5VZE5 725 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 ALS2CLQ60I27 953 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 JADE1Q6IE81 842 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 SPOPLQ6IQ16 392 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 PLEKHA7Q6IQ23 1121 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 C8orf74Q6P047 294 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 EMBQ6PCB8 327 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 ADGRE4PQ86SQ3 457 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 ERICH1Q86X53 443 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 DNAAF5Q86Y56 855 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 EFCAB13Q8IY85 973 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 ULK2Q8IYT8 1036 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 RCOR2Q8IZ40 523 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 BCL6BQ8N143 479 aaPredicted RBP4.68□□□□□ -1.66
SRP54-212ENST00000556992 BEST2Q8NFU1 509 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.68□□□□□ -1.66
SRP54-212ENST00000556992 ZNF564Q8TBZ8 553 aaPredicted RBP4.68□□□□□ -1.66
SRP54-212ENST00000556992 DNAJB3Q8WWF6 145 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 ASB15Q8WXK1 588 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 PGBD4Q96DM1 585 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 CPB2Q96IY4 423 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 PKNOX2Q96KN3 472 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 KRT12Q99456 494 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 ZSWIM1Q9BR11 485 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 CELF4Q9BZC1 486 aaKnown RBP4.68□□□□□ -1.66
SRP54-212ENST00000556992 TRIM6Q9C030 488 aaPredicted RBP4.68□□□□□ -1.66
SRP54-212ENST00000556992 NRDE2Q9H7Z3 1164 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 ACP6Q9NPH0 428 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 CHST12Q9NRB3 414 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 HOMER3Q9NSC5 361 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 RBM12Q9NTZ6 932 aaKnown RBP4.68□□□□□ -1.66
SRP54-212ENST00000556992 WDR35Q9P2L0 1181 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 IP6K2Q9UHH9 426 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 PACSIN2Q9UNF0 486 aaPredicted RBP4.68□□□□□ -1.66
SRP54-212ENST00000556992 AGAP1Q9UPQ3 857 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 GINS2Q9Y248 185 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 BRCA1P38398 1863 aaKnown RBP4.68□□□□□ -1.66
SRP54-212ENST00000556992 MYH6P13533 1939 aa4.68□□□□□ -1.66
SRP54-212ENST00000556992 DOCK1Q14185 1865 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 TMEM191CA6NGB0 347 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 TMEM110-MUSTN1A8MSY1 372 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 PODXLO00592 558 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 SEPT4O43236 478 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 ADCY6O43306 1168 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 CABYRO75952 493 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 NPTXRO95502 500 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 C6orf222P0C671 652 aaPredicted RBP4.67□□□□□ -1.66
SRP54-212ENST00000556992 VDRP11473 427 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 KCNE1P15382 129 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 CD19P15391 556 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 CYP3A5P20815 502 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 PAX3P23760 479 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 LMO1P25800 156 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 HOXC8P31273 242 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 CHRNA3P32297 505 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 CDH5P33151 784 aaPredicted RBP4.67□□□□□ -1.66
SRP54-212ENST00000556992 CTNNA1P35221 906 aaKnown RBP4.67□□□□□ -1.66
SRP54-212ENST00000556992 FLT3LGP49771 235 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 RAD23BP54727 409 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 DRG2P55039 364 aaKnown RBP4.67□□□□□ -1.66
SRP54-212ENST00000556992 NOMO3P69849 1222 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 BEX3Q00994 111 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 SP3Q02447 781 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 GUCY2DQ02846 1103 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 DHX34Q14147 1143 aaKnown RBP4.67□□□□□ -1.66
SRP54-212ENST00000556992 PIGHQ14442 188 aaPredicted RBP4.67□□□□□ -1.66
SRP54-212ENST00000556992 ZNF268Q14587 947 aaPredicted RBP4.67□□□□□ -1.66
SRP54-212ENST00000556992 SMC1AQ14683 1233 aaKnown RBP4.67□□□□□ -1.66
SRP54-212ENST00000556992 CASP8Q14790 479 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 CRY1Q16526 586 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 HSP90B2PQ58FF3 399 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 SEL1L2Q5TEA6 688 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 LAIR1Q6GTX8 287 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 DCUN1D2Q6PH85 259 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 ALKAL1Q6UXT8 129 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 MMS22LQ6ZRQ5 1243 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 FAM43BQ6ZT52 329 aaPredicted RBP4.67□□□□□ -1.66
SRP54-212ENST00000556992 MON1BQ7L1V2 547 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 RPAINQ86UA6 219 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 UNC93AQ86WB7 457 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 CDR2LQ86X02 465 aaPredicted RBP4.67□□□□□ -1.66
SRP54-212ENST00000556992 RHOT1Q8IXI2 618 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 KLHL7Q8IXQ5 586 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 HACE1Q8IYU2 909 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 LRRC52Q8N7C0 313 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 PCSK9Q8NBP7 692 aaKnown RBP4.67□□□□□ -1.66
SRP54-212ENST00000556992 HIPK4Q8NE63 616 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 HDAC7Q8WUI4 952 aa4.67□□□□□ -1.66
SRP54-212ENST00000556992 IFT81Q8WYA0 676 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms