RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 PLK5Q496M5 336 aa25.1■■□□□ 1.61
SDR39U1-221ENST00000556707 CACUL1Q86Y37 369 aa25.1■■□□□ 1.61
SDR39U1-221ENST00000556707 STK40Q8N2I9 435 aa25.1■■□□□ 1.61
SDR39U1-221ENST00000556707 FAM160A2Q8N612 972 aaPredicted RBP25.1■■□□□ 1.61
SDR39U1-221ENST00000556707 FRMD1Q8N878 549 aa25.1■■□□□ 1.61
SDR39U1-221ENST00000556707 ACRBPQ8NEB7 543 aa25.1■■□□□ 1.61
SDR39U1-221ENST00000556707 HMCESQ96FZ2 354 aa25.1■■□□□ 1.61
SDR39U1-221ENST00000556707 CSPG4P5Q96PW8 444 aa25.1■■□□□ 1.61
SDR39U1-221ENST00000556707 FAM129BQ96TA1 746 aa25.1■■□□□ 1.61
SDR39U1-221ENST00000556707 LRRC19Q9H756 370 aa25.1■■□□□ 1.61
SDR39U1-221ENST00000556707 ITM2CQ9NQX7 267 aa25.1■■□□□ 1.61
SDR39U1-221ENST00000556707 RCOR3Q9P2K3 495 aaPredicted RBP25.1■■□□□ 1.61
SDR39U1-221ENST00000556707 MBD1Q9UIS9 605 aaPredicted RBP25.1■■□□□ 1.61
SDR39U1-221ENST00000556707 CYP8B1Q9UNU6 501 aa25.1■■□□□ 1.61
SDR39U1-221ENST00000556707 ZNF292O60281 2723 aa25.1■■□□□ 1.61
SDR39U1-221ENST00000556707 SHROOM3Q8TF72 1996 aa25.09■■□□□ 1.61
SDR39U1-221ENST00000556707 IGHV1OR15-9A0A0B4J2B8 117 aa25.09■■□□□ 1.61
SDR39U1-221ENST00000556707 RCCD1A6NED2 376 aa25.09■■□□□ 1.61
SDR39U1-221ENST00000556707 ZSCAN5CA6NGD5 496 aaPredicted RBP25.09■■□□□ 1.61
SDR39U1-221ENST00000556707 RNASEH1O60930 286 aaKnown RBP25.09■■□□□ 1.61
SDR39U1-221ENST00000556707 ACADMP11310 421 aa25.09■■□□□ 1.61
SDR39U1-221ENST00000556707 SLC1A1P43005 524 aa25.09■■□□□ 1.61
SDR39U1-221ENST00000556707 GEMIN4P57678 1058 aaKnown RBP25.09■■□□□ 1.61
SDR39U1-221ENST00000556707 SERINC3Q13530 473 aa25.09■■□□□ 1.61
SDR39U1-221ENST00000556707 ELAVL3Q14576 367 aaKnown RBP25.09■■□□□ 1.61
SDR39U1-221ENST00000556707 LAIR1Q6GTX8 287 aa25.09■■□□□ 1.61
SDR39U1-221ENST00000556707 Q6ZVU0 165 aa25.09■■□□□ 1.61
SDR39U1-221ENST00000556707 ZNF354CQ86Y25 554 aa25.09■■□□□ 1.61
SDR39U1-221ENST00000556707 DUSP15Q9H1R2 295 aaPredicted RBP25.09■■□□□ 1.61
SDR39U1-221ENST00000556707 CD93Q9NPY3 652 aa25.09■■□□□ 1.61
SDR39U1-221ENST00000556707 USP34Q70CQ2 3546 aa25.08■■□□□ 1.61
SDR39U1-221ENST00000556707 GFRA3O60609 400 aa25.08■■□□□ 1.61
SDR39U1-221ENST00000556707 CD160O95971 181 aa25.08■■□□□ 1.61
SDR39U1-221ENST00000556707 AMPD1P23109 780 aa25.08■■□□□ 1.61
SDR39U1-221ENST00000556707 MRE11P49959 708 aa25.08■■□□□ 1.61
SDR39U1-221ENST00000556707 TPMTP51580 245 aa25.08■■□□□ 1.61
SDR39U1-221ENST00000556707 VAV2P52735 878 aa25.08■■□□□ 1.61
SDR39U1-221ENST00000556707 PDK2Q15119 407 aa25.08■■□□□ 1.61
SDR39U1-221ENST00000556707 ELF2Q15723 593 aa25.08■■□□□ 1.61
SDR39U1-221ENST00000556707 AFMIDQ63HM1 303 aa25.08■■□□□ 1.61
SDR39U1-221ENST00000556707 C22orf39Q6P5X5 142 aa25.08■■□□□ 1.61
SDR39U1-221ENST00000556707 LZTR1Q8N653 840 aa25.08■■□□□ 1.61
SDR39U1-221ENST00000556707 KCTD6Q8NC69 237 aa25.08■■□□□ 1.61
SDR39U1-221ENST00000556707 CELF6Q96J87 481 aaKnown RBP25.08■■□□□ 1.61
SDR39U1-221ENST00000556707 CEP44Q9C0F1 390 aa25.08■■□□□ 1.61
SDR39U1-221ENST00000556707 TNRC6BQ9UPQ9 1833 aaKnown RBP25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 ARHGAP42A6NI28 874 aa25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 BTNL10A8MVZ5 291 aa25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 PJA2O43164 708 aa25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 MAP3K13O43283 966 aa25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 BUB1BO60566 1050 aaPredicted RBP25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 RHOBTB1O94844 696 aa25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 IGLV3-19P01714 112 aa25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 DNTTP04053 509 aa25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 CD48P09326 243 aa25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 IL4RP24394 825 aa25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 DPYSL3Q14195 570 aa25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 LRRC38Q5VT99 294 aa25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 PMS2CLQ68D20 193 aa25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 SLC36A4Q6YBV0 504 aa25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 MMAAQ8IVH4 418 aaKnown RBP25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 MAP7D3Q8IWC1 876 aa25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 ARHGAP12Q8IWW6 846 aa25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 NPWQ8N729 165 aa25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 OR8D1Q8WZ84 308 aa25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 SLC39A8Q9C0K1 460 aa25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 ETNK2Q9NVF9 386 aa25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 SALL4Q9UJQ4 1053 aa25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 SCML1Q9UN30 329 aa25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 ACTL7AQ9Y615 435 aa25.07■■□□□ 1.6
SDR39U1-221ENST00000556707 MCF2LO15068 1137 aa25.06■■□□□ 1.6
SDR39U1-221ENST00000556707 ALOX15BO15296 676 aa25.06■■□□□ 1.6
SDR39U1-221ENST00000556707 COMTP21964 271 aa25.06■■□□□ 1.6
SDR39U1-221ENST00000556707 OXTRP30559 389 aa25.06■■□□□ 1.6
SDR39U1-221ENST00000556707 MMRN1Q13201 1228 aa25.06■■□□□ 1.6
SDR39U1-221ENST00000556707 CST6Q15828 149 aa25.06■■□□□ 1.6
SDR39U1-221ENST00000556707 TTC31Q49AM3 519 aaPredicted RBP25.06■■□□□ 1.6
SDR39U1-221ENST00000556707 TMCO3Q6UWJ1 677 aa25.06■■□□□ 1.6
SDR39U1-221ENST00000556707 DSG4Q86SJ6 1040 aa25.06■■□□□ 1.6
SDR39U1-221ENST00000556707 KIAA1328Q86T90 577 aa25.06■■□□□ 1.6
SDR39U1-221ENST00000556707 PCDH20Q8N6Y1 951 aaKnown RBP25.06■■□□□ 1.6
SDR39U1-221ENST00000556707 ISG20Q96AZ6 181 aaKnown RBP25.06■■□□□ 1.6
SDR39U1-221ENST00000556707 LOXL4Q96JB6 756 aa25.06■■□□□ 1.6
SDR39U1-221ENST00000556707 CALR3Q96L12 384 aaKnown RBP25.06■■□□□ 1.6
SDR39U1-221ENST00000556707 CCDC114Q96M63 670 aa25.06■■□□□ 1.6
SDR39U1-221ENST00000556707 ZNF670Q9BS34 389 aa25.06■■□□□ 1.6
SDR39U1-221ENST00000556707 CALN1Q9BXU9 219 aa25.06■■□□□ 1.6
SDR39U1-221ENST00000556707 LACRTQ9GZZ8 138 aa25.06■■□□□ 1.6
SDR39U1-221ENST00000556707 PABPC3Q9H361 631 aaKnown RBP25.06■■□□□ 1.6
SDR39U1-221ENST00000556707 KLHL11Q9NVR0 708 aa25.06■■□□□ 1.6
SDR39U1-221ENST00000556707 MFHAS1Q9Y4C4 1052 aa25.06■■□□□ 1.6
SDR39U1-221ENST00000556707 FARP1Q9Y4F1 1045 aaPredicted RBP25.06■■□□□ 1.6
SDR39U1-221ENST00000556707 BUB1O43683 1085 aa25.05■■□□□ 1.6
SDR39U1-221ENST00000556707 SPOPO43791 374 aa25.05■■□□□ 1.6
SDR39U1-221ENST00000556707 BNIP3LO60238 219 aa25.05■■□□□ 1.6
SDR39U1-221ENST00000556707 ZNF821O75541 412 aaPredicted RBP25.05■■□□□ 1.6
SDR39U1-221ENST00000556707 CD6P30203 668 aa25.05■■□□□ 1.6
SDR39U1-221ENST00000556707 PAPOLAP51003 745 aaKnown RBP25.05■■□□□ 1.6
SDR39U1-221ENST00000556707 ZFYVE27Q5T4F4 411 aa25.05■■□□□ 1.6
SDR39U1-221ENST00000556707 C11orf63Q6NUN7 778 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms