RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 ANKRD20A1Q5TYW2 823 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 ANKRD20A3Q5VUR7 823 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 TRIM68Q6AZZ1 485 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 PPP1R21Q6ZMI0 780 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 CCDC33Q8N5R6 958 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.4□□□□□ -0.9
ACTN1-218ENST00000556343 NAT16Q8N8M0 369 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 EIF1ADQ8N9N8 165 aaKnown RBP9.4□□□□□ -0.9
ACTN1-218ENST00000556343 OR7D4Q8NG98 312 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 RIN3Q8TB24 985 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 MAML1Q92585 1016 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 MSANTD3Q96H12 275 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 TEKT5Q96M29 485 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 PNKPQ96T60 521 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 IL12RB2Q99665 862 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 CINPQ9BW66 212 aaPredicted RBP9.4□□□□□ -0.9
ACTN1-218ENST00000556343 PLA2G2FQ9BZM2 168 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 NOL6Q9H6R4 1146 aaKnown RBP9.4□□□□□ -0.9
ACTN1-218ENST00000556343 C8orf33Q9H7E9 229 aaPredicted RBP9.4□□□□□ -0.9
ACTN1-218ENST00000556343 EPB41L5Q9HCM4 733 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 TRPV5Q9NQA5 729 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 ARGLU1Q9NWB6 273 aaPredicted RBP9.4□□□□□ -0.9
ACTN1-218ENST00000556343 WHRNQ9P202 907 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 MTRF1LQ9UGC7 380 aaKnown RBP9.4□□□□□ -0.9
ACTN1-218ENST00000556343 PRKAG3Q9UGI9 489 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 GGA2Q9UJY4 613 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 FBXO10Q9UK96 956 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 TPX2Q9ULW0 747 aaKnown RBP9.4□□□□□ -0.9
ACTN1-218ENST00000556343 PLA2G4CQ9UP65 541 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 SLC27A6Q9Y2P4 619 aa9.4□□□□□ -0.9
ACTN1-218ENST00000556343 AAR2Q9Y312 384 aaKnown RBP9.4□□□□□ -0.9
ACTN1-218ENST00000556343 TBC1D3BA6NDS4 549 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 ERI2A8K979 691 aaKnown RBP9.39□□□□□ -0.91
ACTN1-218ENST00000556343 J3KR12 359 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 KCNK1O00180 336 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 CTIFO43310 598 aaKnown RBP9.39□□□□□ -0.91
ACTN1-218ENST00000556343 TULP3O75386 442 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 APODP05090 189 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 SRPRAP08240 638 aaKnown RBP9.39□□□□□ -0.91
ACTN1-218ENST00000556343 GLULP15104 373 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 VAV1P15498 845 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 SP100P23497 879 aaPredicted RBP9.39□□□□□ -0.91
ACTN1-218ENST00000556343 PTPN3P26045 913 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 MZF1P28698 734 aaPredicted RBP9.39□□□□□ -0.91
ACTN1-218ENST00000556343 RPL22P35268 128 aaKnown RBP9.39□□□□□ -0.91
ACTN1-218ENST00000556343 VPS41P49754 854 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 GEMP55040 296 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 BASP1P80723 227 aaKnown RBP9.39□□□□□ -0.91
ACTN1-218ENST00000556343 CDK16Q00536 496 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 ECT2LQ008S8 904 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 HLTFQ14527 1009 aaKnown RBP eCLIP9.39□□□□□ -0.91
ACTN1-218ENST00000556343 MORF4L2Q15014 288 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 EIF4HQ15056 248 aaKnown RBP9.39□□□□□ -0.91
ACTN1-218ENST00000556343 TRIP13Q15645 432 aaPredicted RBP9.39□□□□□ -0.91
ACTN1-218ENST00000556343 FSCBQ5H9T9 825 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 PITRM1Q5JRX3 1037 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 RALGPS1Q5JS13 557 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 MBLAC2Q68D91 279 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 DUPD1Q68J44 220 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 B4GALNT4Q76KP1 1039 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 SLC44A3Q8N4M1 653 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 NETO2Q8NC67 525 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 USP33Q8TEY7 942 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 IFT81Q8WYA0 676 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 DNASE1L2Q92874 299 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 TTC17Q96AE7 1141 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 ZFYVE19Q96K21 471 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 AGAP3Q96P47 875 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 FRMD8Q9BZ67 464 aaPredicted RBP9.39□□□□□ -0.91
ACTN1-218ENST00000556343 FOXP3Q9BZS1 431 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 TRIM31Q9BZY9 425 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 POLR1EQ9GZS1 481 aaKnown RBP9.39□□□□□ -0.91
ACTN1-218ENST00000556343 DPH5Q9H2P9 285 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 C10orf88Q9H8K7 445 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 KCNK12Q9HB15 430 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 RAB6BQ9NRW1 208 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.39□□□□□ -0.91
ACTN1-218ENST00000556343 RSPH14Q9UHP6 348 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 ANAPC5Q9UJX4 755 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 SNX24Q9Y343 169 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 FARP1Q9Y4F1 1045 aaPredicted RBP9.39□□□□□ -0.91
ACTN1-218ENST00000556343 TTLL3Q9Y4R7 772 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 OR51B4Q9Y5P0 310 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 V9GYY5 206 aaPredicted RBP9.39□□□□□ -0.91
ACTN1-218ENST00000556343 DOCK6Q96HP0 2047 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 ATG2AQ2TAZ0 1938 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 DENND4CQ5VZ89 1909 aa9.39□□□□□ -0.91
ACTN1-218ENST00000556343 DNALI1O14645 258 aaPredicted RBP9.38□□□□□ -0.91
ACTN1-218ENST00000556343 ZBTB24O43167 697 aaPredicted RBP9.38□□□□□ -0.91
ACTN1-218ENST00000556343 CISD3P0C7P0 127 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 ZSCAN5DPP0CG00 497 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 ETS1P14921 441 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 CA4P22748 312 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 HLA-FP30511 346 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 CD70P32970 193 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 GJA4P35212 333 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 GRIA2P42262 883 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 MAPK8P45983 427 aa9.38□□□□□ -0.91
ACTN1-218ENST00000556343 RECQLP46063 649 aaPredicted RBP9.38□□□□□ -0.91
ACTN1-218ENST00000556343 VASPP50552 380 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms