RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 GFPT1Q06210 699 aaPredicted RBP9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 CYP24A1Q07973 514 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 SLC14A1Q13336 389 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 HNRNPDQ14103 355 aaKnown RBP9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 LYSMD4Q5XG99 296 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 SPOCD1Q6ZMY3 1216 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 STXBP4Q6ZWJ1 553 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 TRMT11Q7Z4G4 463 aaKnown RBP9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 TTC30AQ86WT1 665 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 MIB1Q86YT6 1006 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 C12orf56Q8IXR9 622 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 CRYBG2Q8N1P7 616 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 SCAMP5Q8TAC9 235 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 TMEM174Q8WUU8 243 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 CGRRF1Q99675 332 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 C7orf25Q9BPX7 421 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 TRIM9Q9C026 710 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 LRRC27Q9C0I9 530 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 TNMDQ9H2S6 317 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 ZDHHC4Q9NPG8 344 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 SPHK2Q9NRA0 654 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 AGPAT3Q9NRZ7 376 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 SIRT5Q9NXA8 310 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 FBXO10Q9UK96 956 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 ARID1BQ8NFD5 2236 aaPredicted RBP9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 IGHV1OR15-9A0A0B4J2B8 117 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 SPAARA0A1B0GVQ0 90 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 TCRBV21S2A2A0A5A6 115 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 TRIM24O15164 1050 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 AP5Z1O43299 807 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 ZNF217O75362 1048 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 KCNH1O95259 989 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 C4BPAP04003 597 aaKnown RBP9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 CISD3P0C7P0 127 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 NAT2P11245 290 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 TNNI1P19237 187 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 DNAJA1P31689 397 aaKnown RBP9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 L1CAMP32004 1257 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 SEPHS1P49903 392 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 CDH8P55286 799 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 MYL6P60660 151 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 SIM1P81133 766 aaPredicted RBP9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 ZNF33AQ06730 810 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 BTBD8Q5XKL5 378 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 RABEPKQ7Z6M1 372 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 SLC41A1Q8IVJ1 513 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 BBS7Q8IWZ6 715 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 FUKQ8N0W3 1084 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 TERB1Q8NA31 727 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 XXYLT1Q8NBI6 393 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 NOC3LQ8WTT2 800 aaKnown RBP9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 SCFD1Q8WVM8 642 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 FBXO32Q969P5 355 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 CCDC127Q96BQ5 260 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 USP28Q96RU2 1077 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 ACOX2Q99424 681 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 GABRG3Q99928 467 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 LGR4Q9BXB1 951 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 CUEDC2Q9H467 287 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 CSNK1G1Q9HCP0 422 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 BCCIPQ9P287 314 aaKnown RBP eCLIP9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 CGNQ9P2M7 1197 aaKnown RBP9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 KLK13Q9UKR3 277 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 EMC9Q9Y3B6 208 aa9.43□□□□□ -0.9
GTF2A1-204ENST00000556268 VPS37CA5D8V6 355 aaPredicted RBP9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 CACNG3O60359 315 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 OPHN1O60890 802 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 BEST1O76090 585 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 DLATP10515 647 aaKnown RBP9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 TACR1P25103 407 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 RDXP35241 583 aaKnown RBP9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 CORO7P57737 925 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 TNNC1P63316 161 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 AMPD3Q01432 767 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 CEBPZQ03701 1054 aaKnown RBP9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 BMT2Q1RMZ1 405 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 RPTNQ6XPR3 784 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 DBX2Q6ZNG2 339 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 TMC6Q7Z403 805 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 HDDC3Q8N4P3 179 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 CHCHD4Q8N4Q1 142 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 ZNF276Q8N554 614 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 DEFB119Q8N690 84 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 PDILTQ8N807 584 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 LINC00301Q8NCQ3 95 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 BVESQ8NE79 360 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 ZMIZ2Q8NF64 920 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 PLEKHO2Q8TD55 490 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 IPO4Q8TEX9 1081 aaKnown RBP9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 ZCCHC14Q8WYQ9 949 aaKnown RBP9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 DNASE2BQ8WZ79 361 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 SYAP1Q96A49 352 aaPredicted RBP9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 SMOQ99835 787 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 CNTD2Q9H8S5 307 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 FSCN3Q9NQT6 498 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 DMAC2Q9NW81 257 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 CALCOCO1Q9P1Z2 691 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 WDR35Q9P2L0 1181 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 MTMR6Q9Y217 621 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 SH3BP1Q9Y3L3 701 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms