RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 AP1B1Q10567 949 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 IFRD2Q12894 506 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-235ENST00000556082 MPP2Q14168 576 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 DOC2BQ14184 412 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 TRIP4Q15650 581 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-235ENST00000556082 DDR2Q16832 855 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 USP41Q3LFD5 358 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 TEX44Q53QW1 395 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 LGSNQ5TDP6 509 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 SNX30Q5VWJ9 437 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 ARMC3Q5W041 872 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 NUGGCQ68CJ6 796 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 ITPRIPL1Q6GPH6 555 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 RGS9BPQ6ZS82 235 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 DENND5BQ6ZUT9 1274 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 PID1Q7Z2X4 250 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 SLC26A11Q86WA9 606 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 ZNF683Q8IZ20 524 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 NPWQ8N729 165 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 ATAD1Q8NBU5 361 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 CCNYQ8ND76 341 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 ZNF473Q8WTR7 871 aaKnown RBP8.49□□□□□ -1.05
ATXN3-235ENST00000556082 MZB1Q8WU39 189 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 DCAKDQ8WVC6 231 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 CKAP2Q8WWK9 683 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 OVCA2Q8WZ82 227 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 TBC1D31Q96DN5 1066 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 FCRL2Q96LA5 508 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-235ENST00000556082 TEKT5Q96M29 485 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 CDK5RAP1Q96SZ6 601 aaKnown RBP8.49□□□□□ -1.05
ATXN3-235ENST00000556082 PPP1R12CQ9BZL4 782 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 FAM107BQ9H098 131 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 TRABDQ9H4I3 376 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 PLAC1Q9HBJ0 212 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 PPANQ9NQ55 473 aaKnown RBP8.49□□□□□ -1.05
ATXN3-235ENST00000556082 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.49□□□□□ -1.05
ATXN3-235ENST00000556082 OSER1Q9NX31 292 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 NKIRAS1Q9NYS0 192 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 MOCS1Q9NZB8 636 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 PPARGC1AQ9UBK2 798 aaKnown RBP8.49□□□□□ -1.05
ATXN3-235ENST00000556082 MTRRQ9UBK8 725 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 MAFFQ9ULX9 164 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 CHMP2BQ9UQN3 213 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 TTC3P53804 2025 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 ATXN2Q99700 1313 aaKnown RBP8.49□□□□□ -1.05
ATXN3-235ENST00000556082 PATJQ8NI35 1801 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 IGLV3-10A0A075B6K4 115 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 IQANK1A0A1B0GTG1 560 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 MAGEB16A2A368 324 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 FAM159BA6NKW6 160 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 DRGXA6NNA5 263 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 C9orf172C9J069 976 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 TGFBR3LH3BV60 316 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 TYROBPO43914 113 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 AVILO75366 819 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 AP2A1O95782 977 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 CPP00450 1065 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 IGLV3-27P01718 113 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 APOEP02649 317 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 NID1P14543 1247 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 CREB1P16220 341 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 EPB42P16452 691 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 IFNAR2P48551 515 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 TUBP50607 506 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 CCL23P55773 120 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 TBX4P57082 545 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 HTRA3P83110 453 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 NAB1Q13506 487 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 TMED2Q15363 201 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 PKN2Q16513 984 aaKnown RBP8.48□□□□□ -1.05
ATXN3-235ENST00000556082 TRIM60Q495X7 471 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 RTP2Q5QGT7 225 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 FAXCQ5TGI0 409 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 KCTD11Q693B1 232 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 KLHDC10Q6PID8 442 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 RSPO2Q6UXX9 243 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-235ENST00000556082 UNC5AQ6ZN44 842 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 SH2D5Q6ZV89 423 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 MICALCLQ6ZW33 695 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 PIGWQ7Z7B1 504 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 LRRC6Q86X45 466 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 CEP57Q86XR8 500 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 SRRM1Q8IYB3 904 aaKnown RBP8.48□□□□□ -1.05
ATXN3-235ENST00000556082 UMODL1-AS1Q8N2C9 162 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 TAB3Q8N5C8 712 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-235ENST00000556082 RTL3Q8N8U3 475 aaKnown RBP8.48□□□□□ -1.05
ATXN3-235ENST00000556082 GSDMBQ8TAX9 411 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 TOP1MTQ969P6 601 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 TTC17Q96AE7 1141 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 ARMC5Q96C12 935 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 VWCEQ96DN2 955 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 STAMBPL1Q96FJ0 436 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 SCLYQ96I15 445 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 IGSF21Q96ID5 467 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 SMC6Q96SB8 1091 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 PAFAH2Q99487 392 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 UBE2OQ9C0C9 1292 aaKnown RBP8.48□□□□□ -1.05
ATXN3-235ENST00000556082 GBA3Q9H227 469 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 CWH43Q9H720 699 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 KCNK9Q9NPC2 374 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms