RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 SMAD6O43541 496 aaKnown RBP18.83■□□□□ 0.6
NEDD1-208ENST00000555806 LRIG2O94898 1065 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 PLEKP08567 350 aaPredicted RBP18.83■□□□□ 0.6
NEDD1-208ENST00000555806 TBC1D3HP0C7X1 549 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 RHOQP17081 205 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 DESP17661 470 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 RECQLP46063 649 aaPredicted RBP18.83■□□□□ 0.6
NEDD1-208ENST00000555806 ZNF143P52747 638 aaPredicted RBP18.83■□□□□ 0.6
NEDD1-208ENST00000555806 RPL7AP62424 266 aaKnown RBP18.83■□□□□ 0.6
NEDD1-208ENST00000555806 FOXC1Q12948 553 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 KIF19Q2TAC6 998 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 HLA-BQ31612 363 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 FAM72AQ5TYM5 149 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 MANEALQ5VSG8 457 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 TBC1D3GQ6DHY5 549 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 TBC1D3CQ6IPX1 549 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 FAM72DQ6L9T8 149 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 RETSATQ6NUM9 610 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 C22orf39Q6P5X5 142 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 SLFN11Q7Z7L1 901 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 LUZP1Q86V48 1076 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 FAM72BQ86X60 149 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 TBC1D3Q8IZP1 549 aaPredicted RBP18.83■□□□□ 0.6
NEDD1-208ENST00000555806 SLC6A18Q96N87 628 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 SYT11Q9BT88 431 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 MAGEB5Q9BZ81 275 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 TNKS2Q9H2K2 1166 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 IL21RQ9HBE5 538 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 PPM1HQ9ULR3 514 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 ANKRD6Q9Y2G4 727 aa18.83■□□□□ 0.6
NEDD1-208ENST00000555806 PLXNA2O75051 1894 aa18.82■□□□□ 0.6
NEDD1-208ENST00000555806 SPAARA0A1B0GVQ0 90 aa18.82■□□□□ 0.6
NEDD1-208ENST00000555806 TCRBV5S1A1TA0A578 114 aa18.82■□□□□ 0.6
NEDD1-208ENST00000555806 SLC7A4O43246 635 aa18.82■□□□□ 0.6
NEDD1-208ENST00000555806 SH3BP5O60239 455 aa18.82■□□□□ 0.6
NEDD1-208ENST00000555806 RTN2O75298 545 aa18.82■□□□□ 0.6
NEDD1-208ENST00000555806 PTMSP20962 102 aa18.82■□□□□ 0.6
NEDD1-208ENST00000555806 CHRNA3P32297 505 aa18.82■□□□□ 0.6
NEDD1-208ENST00000555806 ETFBP38117 255 aa18.82■□□□□ 0.6
NEDD1-208ENST00000555806 MAPKAPK2P49137 400 aa18.82■□□□□ 0.6
NEDD1-208ENST00000555806 CCR5P51681 352 aa18.82■□□□□ 0.6
NEDD1-208ENST00000555806 C21orf59P57076 290 aa18.82■□□□□ 0.6
NEDD1-208ENST00000555806 RACK1P63244 317 aaKnown RBP18.82■□□□□ 0.6
NEDD1-208ENST00000555806 SIM1P81133 766 aaPredicted RBP18.82■□□□□ 0.6
NEDD1-208ENST00000555806 CNTN1Q12860 1018 aa18.82■□□□□ 0.6
NEDD1-208ENST00000555806 EFHC2Q5JST6 749 aa18.82■□□□□ 0.6
NEDD1-208ENST00000555806 NAXDQ8IW45 347 aa18.82■□□□□ 0.6
NEDD1-208ENST00000555806 ORAI3Q9BRQ5 295 aa18.82■□□□□ 0.6
NEDD1-208ENST00000555806 HAUS4Q9H6D7 363 aa18.82■□□□□ 0.6
NEDD1-208ENST00000555806 AASDHPPTQ9NRN7 309 aa18.82■□□□□ 0.6
NEDD1-208ENST00000555806 TM7SF3Q9NS93 570 aa18.82■□□□□ 0.6
NEDD1-208ENST00000555806 TMEM248Q9NWD8 314 aa18.82■□□□□ 0.6
NEDD1-208ENST00000555806 DNAI1Q9UI46 699 aa18.82■□□□□ 0.6
NEDD1-208ENST00000555806 FNDC3AQ9Y2H6 1198 aaKnown RBP18.82■□□□□ 0.6
NEDD1-208ENST00000555806 SNX11Q9Y5W9 270 aa18.82■□□□□ 0.6
NEDD1-208ENST00000555806 GOLGA6L19H0YKK7 550 aa18.81■□□□□ 0.6
NEDD1-208ENST00000555806 KPNA3O00505 521 aaPredicted RBP18.81■□□□□ 0.6
NEDD1-208ENST00000555806 ATMINO43313 823 aaPredicted RBP18.81■□□□□ 0.6
NEDD1-208ENST00000555806 ACVRL1P37023 503 aa18.81■□□□□ 0.6
NEDD1-208ENST00000555806 SERPINH1P50454 418 aaKnown RBP18.81■□□□□ 0.6
NEDD1-208ENST00000555806 PPP2CBP62714 309 aa18.81■□□□□ 0.6
NEDD1-208ENST00000555806 PPP2CAP67775 309 aa18.81■□□□□ 0.6
NEDD1-208ENST00000555806 FANCCQ00597 558 aa18.81■□□□□ 0.6
NEDD1-208ENST00000555806 KLHL30Q0D2K2 578 aa18.81■□□□□ 0.6
NEDD1-208ENST00000555806 SCAPQ12770 1279 aa18.81■□□□□ 0.6
NEDD1-208ENST00000555806 NR1I3Q14994 352 aa18.81■□□□□ 0.6
NEDD1-208ENST00000555806 PPP1R15BQ5SWA1 713 aa18.81■□□□□ 0.6
NEDD1-208ENST00000555806 E4F1Q66K89 784 aaPredicted RBP18.81■□□□□ 0.6
NEDD1-208ENST00000555806 NLRP14Q86W24 1093 aa18.81■□□□□ 0.6
NEDD1-208ENST00000555806 CHST14Q8NCH0 376 aa18.81■□□□□ 0.6
NEDD1-208ENST00000555806 OR2A12Q8NGT7 310 aa18.81■□□□□ 0.6
NEDD1-208ENST00000555806 GRIN3AQ8TCU5 1115 aa18.81■□□□□ 0.6
NEDD1-208ENST00000555806 SETD7Q8WTS6 366 aaKnown RBP18.81■□□□□ 0.6
NEDD1-208ENST00000555806 VCPIP1Q96JH7 1222 aa18.81■□□□□ 0.6
NEDD1-208ENST00000555806 CAMK1GQ96NX5 476 aa18.81■□□□□ 0.6
NEDD1-208ENST00000555806 CNPY3Q9BT09 278 aa18.81■□□□□ 0.6
NEDD1-208ENST00000555806 ACE2Q9BYF1 805 aaPredicted RBP18.81■□□□□ 0.6
NEDD1-208ENST00000555806 RETREG1Q9H6L5 497 aa18.81■□□□□ 0.6
NEDD1-208ENST00000555806 EBF2Q9HAK2 575 aa18.81■□□□□ 0.6
NEDD1-208ENST00000555806 DYRK4Q9NR20 520 aa18.81■□□□□ 0.6
NEDD1-208ENST00000555806 NDFIP2Q9NV92 336 aa18.81■□□□□ 0.6
NEDD1-208ENST00000555806 AIPL1Q9NZN9 384 aa18.81■□□□□ 0.6
NEDD1-208ENST00000555806 TPX2Q9ULW0 747 aaKnown RBP18.81■□□□□ 0.6
NEDD1-208ENST00000555806 PCDHB9Q9Y5E1 797 aa18.81■□□□□ 0.6
NEDD1-208ENST00000555806 PLRG1O43660 514 aaKnown RBP18.8■□□□□ 0.6
NEDD1-208ENST00000555806 RAMP2O60895 175 aa18.8■□□□□ 0.6
NEDD1-208ENST00000555806 ZMPSTE24O75844 475 aa18.8■□□□□ 0.6
NEDD1-208ENST00000555806 PRNPP04156 253 aa18.8■□□□□ 0.6
NEDD1-208ENST00000555806 CTSLP07711 333 aa18.8■□□□□ 0.6
NEDD1-208ENST00000555806 ZNF883P0CG24 379 aa18.8■□□□□ 0.6
NEDD1-208ENST00000555806 DNA2P51530 1060 aa18.8■□□□□ 0.6
NEDD1-208ENST00000555806 ARF5P84085 180 aa18.8■□□□□ 0.6
NEDD1-208ENST00000555806 SLC20A2Q08357 652 aa18.8■□□□□ 0.6
NEDD1-208ENST00000555806 HNRNPDQ14103 355 aaKnown RBP18.8■□□□□ 0.6
NEDD1-208ENST00000555806 AGBL4Q5VU57 503 aa18.8■□□□□ 0.6
NEDD1-208ENST00000555806 ZNF571Q7Z3V5 609 aaPredicted RBP18.8■□□□□ 0.6
NEDD1-208ENST00000555806 ZNF354CQ86Y25 554 aa18.8■□□□□ 0.6
NEDD1-208ENST00000555806 PYROXD2Q8N2H3 581 aa18.8■□□□□ 0.6
NEDD1-208ENST00000555806 FAM131CQ96AQ9 280 aa18.8■□□□□ 0.6
NEDD1-208ENST00000555806 SKA1Q96BD8 255 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms