RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 GLDCP23378 1020 aa25.02■■□□□ 1.6
PRKCH-216ENST00000555542 RFC1P35251 1148 aaPredicted RBP25.02■■□□□ 1.6
PRKCH-216ENST00000555542 CLCN6P51797 869 aa25.02■■□□□ 1.6
PRKCH-216ENST00000555542 CNTN1Q12860 1018 aa25.02■■□□□ 1.6
PRKCH-216ENST00000555542 SERAC1Q96JX3 654 aa25.02■■□□□ 1.6
PRKCH-216ENST00000555542 DYRK4Q9NR20 520 aa25.02■■□□□ 1.6
PRKCH-216ENST00000555542 TP53BP1Q12888 1972 aaPredicted RBP25.02■■□□□ 1.6
PRKCH-216ENST00000555542 KPNA3O00505 521 aaPredicted RBP25.01■■□□□ 1.59
PRKCH-216ENST00000555542 VILLO15195 856 aa25.01■■□□□ 1.59
PRKCH-216ENST00000555542 FLRT2O43155 660 aa25.01■■□□□ 1.59
PRKCH-216ENST00000555542 TEX33O43247 280 aa25.01■■□□□ 1.59
PRKCH-216ENST00000555542 TRIM16O95361 564 aa25.01■■□□□ 1.59
PRKCH-216ENST00000555542 DESP17661 470 aa25.01■■□□□ 1.59
PRKCH-216ENST00000555542 CHRNA3P32297 505 aa25.01■■□□□ 1.59
PRKCH-216ENST00000555542 CCT8P50990 548 aa25.01■■□□□ 1.59
PRKCH-216ENST00000555542 GSCP56915 257 aaPredicted RBP25.01■■□□□ 1.59
PRKCH-216ENST00000555542 PPP2CBP62714 309 aa25.01■■□□□ 1.59
PRKCH-216ENST00000555542 PPP2CAP67775 309 aa25.01■■□□□ 1.59
PRKCH-216ENST00000555542 GNA12Q03113 381 aa25.01■■□□□ 1.59
PRKCH-216ENST00000555542 ZNF423Q2M1K9 1284 aa25.01■■□□□ 1.59
PRKCH-216ENST00000555542 SLC45A4Q5BKX6 768 aa25.01■■□□□ 1.59
PRKCH-216ENST00000555542 C22orf39Q6P5X5 142 aa25.01■■□□□ 1.59
PRKCH-216ENST00000555542 MON1BQ7L1V2 547 aa25.01■■□□□ 1.59
PRKCH-216ENST00000555542 PRPF39Q86UA1 669 aaKnown RBP25.01■■□□□ 1.59
PRKCH-216ENST00000555542 RHBDD1Q8TEB9 315 aa25.01■■□□□ 1.59
PRKCH-216ENST00000555542 TNKS2Q9H2K2 1166 aa25.01■■□□□ 1.59
PRKCH-216ENST00000555542 KDM4CQ9H3R0 1056 aa25.01■■□□□ 1.59
PRKCH-216ENST00000555542 EBF2Q9HAK2 575 aa25.01■■□□□ 1.59
PRKCH-216ENST00000555542 PCOLCE2Q9UKZ9 415 aa25.01■■□□□ 1.59
PRKCH-216ENST00000555542 PCDHGB2Q9Y5G2 931 aa25.01■■□□□ 1.59
PRKCH-216ENST00000555542 SMAD6O43541 496 aaKnown RBP25■■□□□ 1.59
PRKCH-216ENST00000555542 PLRG1O43660 514 aaKnown RBP25■■□□□ 1.59
PRKCH-216ENST00000555542 CD38P28907 300 aa25■■□□□ 1.59
PRKCH-216ENST00000555542 MAT2AP31153 395 aaKnown RBP25■■□□□ 1.59
PRKCH-216ENST00000555542 ETFBP38117 255 aa25■■□□□ 1.59
PRKCH-216ENST00000555542 ZNF165P49910 485 aa25■■□□□ 1.59
PRKCH-216ENST00000555542 HDAC4P56524 1084 aa25■■□□□ 1.59
PRKCH-216ENST00000555542 C1QBPQ07021 282 aaKnown RBP25■■□□□ 1.59
PRKCH-216ENST00000555542 CCDC15Q0P6D6 951 aa25■■□□□ 1.59
PRKCH-216ENST00000555542 SCYL2Q6P3W7 929 aa25■■□□□ 1.59
PRKCH-216ENST00000555542 WDR59Q6PJI9 974 aa25■■□□□ 1.59
PRKCH-216ENST00000555542 CCDC185Q8N715 623 aa25■■□□□ 1.59
PRKCH-216ENST00000555542 OR2A12Q8NGT7 310 aa25■■□□□ 1.59
PRKCH-216ENST00000555542 GRIN3AQ8TCU5 1115 aa25■■□□□ 1.59
PRKCH-216ENST00000555542 MCEEQ96PE7 176 aa25■■□□□ 1.59
PRKCH-216ENST00000555542 OSBPL2Q9H1P3 480 aa25■■□□□ 1.59
PRKCH-216ENST00000555542 RTN4Q9NQC3 1192 aaKnown RBP25■■□□□ 1.59
PRKCH-216ENST00000555542 SIGLEC16A6NMB1 481 aa24.99■■□□□ 1.59
PRKCH-216ENST00000555542 H0Y8X5 98 aa24.99■■□□□ 1.59
PRKCH-216ENST00000555542 PRNPP04156 253 aa24.99■■□□□ 1.59
PRKCH-216ENST00000555542 TNFAIP3P21580 790 aa24.99■■□□□ 1.59
PRKCH-216ENST00000555542 CTSKP43235 329 aa24.99■■□□□ 1.59
PRKCH-216ENST00000555542 DNA2P51530 1060 aa24.99■■□□□ 1.59
PRKCH-216ENST00000555542 IL9RQ01113 521 aa24.99■■□□□ 1.59
PRKCH-216ENST00000555542 KCNT1Q5JUK3 1230 aa24.99■■□□□ 1.59
PRKCH-216ENST00000555542 AGBL4Q5VU57 503 aa24.99■■□□□ 1.59
PRKCH-216ENST00000555542 DCUN1D2Q6PH85 259 aa24.99■■□□□ 1.59
PRKCH-216ENST00000555542 CENPIQ92674 756 aaPredicted RBP24.99■■□□□ 1.59
PRKCH-216ENST00000555542 TBC1D31Q96DN5 1066 aa24.99■■□□□ 1.59
PRKCH-216ENST00000555542 ZNF212Q9UDV6 495 aa24.99■■□□□ 1.59
PRKCH-216ENST00000555542 IL36AQ9UHA7 158 aa24.99■■□□□ 1.59
PRKCH-216ENST00000555542 DNAI1Q9UI46 699 aa24.99■■□□□ 1.59
PRKCH-216ENST00000555542 WASF3Q9UPY6 502 aa24.99■■□□□ 1.59
PRKCH-216ENST00000555542 TPRP12270 2363 aaKnown RBP24.98■■□□□ 1.59
PRKCH-216ENST00000555542 DFNA5O60443 496 aa24.98■■□□□ 1.59
PRKCH-216ENST00000555542 CTSLP07711 333 aa24.98■■□□□ 1.59
PRKCH-216ENST00000555542 PLEKP08567 350 aaPredicted RBP24.98■■□□□ 1.59
PRKCH-216ENST00000555542 FTH1P19P0C7X4 201 aa24.98■■□□□ 1.59
PRKCH-216ENST00000555542 RHOQP17081 205 aa24.98■■□□□ 1.59
PRKCH-216ENST00000555542 MAPKAPK2P49137 400 aa24.98■■□□□ 1.59
PRKCH-216ENST00000555542 SERPINH1P50454 418 aaKnown RBP24.98■■□□□ 1.59
PRKCH-216ENST00000555542 NRG1Q02297 640 aaPredicted RBP24.98■■□□□ 1.59
PRKCH-216ENST00000555542 SLC20A2Q08357 652 aa24.98■■□□□ 1.59
PRKCH-216ENST00000555542 EFHC2Q5JST6 749 aa24.98■■□□□ 1.59
PRKCH-216ENST00000555542 ACAD10Q6JQN1 1059 aa24.98■■□□□ 1.59
PRKCH-216ENST00000555542 UNQ6494/PRO21346Q6UXR6 183 aa24.98■■□□□ 1.59
PRKCH-216ENST00000555542 SLFN11Q7Z7L1 901 aa24.98■■□□□ 1.59
PRKCH-216ENST00000555542 ZNF354CQ86Y25 554 aa24.98■■□□□ 1.59
PRKCH-216ENST00000555542 HPCAL4Q9UM19 191 aa24.98■■□□□ 1.59
PRKCH-216ENST00000555542 MYO6Q9UM54 1294 aa24.98■■□□□ 1.59
PRKCH-216ENST00000555542 APOBEC2Q9Y235 224 aaKnown RBP24.98■■□□□ 1.59
PRKCH-216ENST00000555542 TMCO5BA8MYB1 307 aa24.97■■□□□ 1.59
PRKCH-216ENST00000555542 FAM72CH0Y354 149 aa24.97■■□□□ 1.59
PRKCH-216ENST00000555542 CCP110O43303 1012 aa24.97■■□□□ 1.59
PRKCH-216ENST00000555542 LRIG2O94898 1065 aa24.97■■□□□ 1.59
PRKCH-216ENST00000555542 ASIC2Q16515 512 aa24.97■■□□□ 1.59
PRKCH-216ENST00000555542 INAVAQ3KP66 663 aa24.97■■□□□ 1.59
PRKCH-216ENST00000555542 FAM72AQ5TYM5 149 aa24.97■■□□□ 1.59
PRKCH-216ENST00000555542 MANEALQ5VSG8 457 aa24.97■■□□□ 1.59
PRKCH-216ENST00000555542 NAPEPLDQ6IQ20 393 aa24.97■■□□□ 1.59
PRKCH-216ENST00000555542 FAM72DQ6L9T8 149 aa24.97■■□□□ 1.59
PRKCH-216ENST00000555542 FAM72BQ86X60 149 aa24.97■■□□□ 1.59
PRKCH-216ENST00000555542 CHCHD4Q8N4Q1 142 aa24.97■■□□□ 1.59
PRKCH-216ENST00000555542 CHST14Q8NCH0 376 aa24.97■■□□□ 1.59
PRKCH-216ENST00000555542 TMIEQ8NEW7 156 aa24.97■■□□□ 1.59
PRKCH-216ENST00000555542 NTAN1Q96AB6 310 aa24.97■■□□□ 1.59
PRKCH-216ENST00000555542 FAM131CQ96AQ9 280 aa24.97■■□□□ 1.59
PRKCH-216ENST00000555542 PPP1R16AQ96I34 528 aa24.97■■□□□ 1.59
PRKCH-216ENST00000555542 CDC6Q99741 560 aa24.97■■□□□ 1.59
PRKCH-216ENST00000555542 CEP44Q9C0F1 390 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms