RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 BADQ92934 168 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 IMP4Q96G21 291 aaKnown RBP9.07□□□□□ -0.96
TDP1-210ENST00000554976 NSMCE3Q96MG7 304 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 CCT8L2Q96SF2 557 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 SELENOSQ9BQE4 189 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 CYP4F11Q9HBI6 524 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 ARNT2Q9HBZ2 717 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 PRKAG3Q9UGI9 489 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 MAGED2Q9UNF1 606 aaPredicted RBP9.07□□□□□ -0.96
TDP1-210ENST00000554976 KIAA1549LQ6ZVL6 1849 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 MUC22E2RYF6 1773 aaPredicted RBP9.07□□□□□ -0.96
TDP1-210ENST00000554976 LCHNA4D1U4 455 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 USP1O94782 785 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 LATS1O95835 1130 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 EN2P19622 333 aaPredicted RBP9.07□□□□□ -0.96
TDP1-210ENST00000554976 PPIGQ13427 754 aaKnown RBP eCLIP9.07□□□□□ -0.96
TDP1-210ENST00000554976 NAB1Q13506 487 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 HNRNPDQ14103 355 aaKnown RBP9.07□□□□□ -0.96
TDP1-210ENST00000554976 PARP15Q460N3 678 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 SPANXN3Q5MJ09 141 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 DNAJB7Q7Z6W7 309 aaPredicted RBP9.07□□□□□ -0.96
TDP1-210ENST00000554976 PIGWQ7Z7B1 504 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 SPATA22Q8NHS9 363 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 PPM1EQ8WY54 764 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 KLHL5Q96PQ7 755 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 FERMT1Q9BQL6 677 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 KIFC1Q9BW19 673 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 MRM3Q9HC36 420 aaKnown RBP9.07□□□□□ -0.96
TDP1-210ENST00000554976 MRPL17Q9NRX2 175 aaKnown RBP9.07□□□□□ -0.96
TDP1-210ENST00000554976 PIH1D1Q9NWS0 290 aaKnown RBP9.07□□□□□ -0.96
TDP1-210ENST00000554976 AGO1Q9UL18 857 aaKnown RBP9.07□□□□□ -0.96
TDP1-210ENST00000554976 LZTS1Q9Y250 596 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 C2orf16Q68DN1 1984 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 FAM237BA0A1B0GVD1 139 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 TTC36A6NLP5 189 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 PRAMEF11O60813 436 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 PAPLNO95428 1278 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 ATP2A2P16615 1042 aaKnown RBP9.07□□□□□ -0.96
TDP1-210ENST00000554976 RPA3P35244 121 aaPredicted RBP9.07□□□□□ -0.96
TDP1-210ENST00000554976 SARNPP82979 210 aaKnown RBP9.07□□□□□ -0.96
TDP1-210ENST00000554976 FPGSQ05932 587 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 IL10RBQ08334 325 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 PLD1Q13393 1074 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 SKIDA1Q1XH10 827 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 ARMC3Q5W041 872 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 C6orf89Q6UWU4 347 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 RANBP10Q6VN20 620 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 CHST9Q7L1S5 443 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 KLHL23Q8NBE8 558 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 SLC22A12Q96S37 553 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 YME1L1Q96TA2 773 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 INTS9Q9NV88 658 aaKnown RBP9.07□□□□□ -0.96
TDP1-210ENST00000554976 IPO11Q9UI26 975 aaKnown RBP9.07□□□□□ -0.96
TDP1-210ENST00000554976 SOX13Q9UN79 622 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 SMG5Q9UPR3 1016 aaKnown RBP9.07□□□□□ -0.96
TDP1-210ENST00000554976 FAM169AQ9Y6X4 670 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 ATXN2Q99700 1313 aaKnown RBP9.06□□□□□ -0.96
TDP1-210ENST00000554976 FAM47DPA6NHR8 397 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 C5orf67F2Z3F1 127 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 PSMD3O43242 534 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 USP12O75317 370 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 MT-CYBP00156 380 aaPredicted RBP9.06□□□□□ -0.96
TDP1-210ENST00000554976 HMBSP08397 361 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 HSPA1AP0DMV8 641 aaKnown RBP9.06□□□□□ -0.96
TDP1-210ENST00000554976 HSPA1BP0DMV9 641 aaKnown RBP9.06□□□□□ -0.96
TDP1-210ENST00000554976 FOXN2P32314 431 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 MSH2P43246 934 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 NPY2RP49146 381 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 SLC1A5Q15758 541 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 ZKSCAN8Q15776 578 aaPredicted RBP9.06□□□□□ -0.96
TDP1-210ENST00000554976 SLC14A2Q15849 920 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 TTC39BQ5VTQ0 682 aaPredicted RBP9.06□□□□□ -0.96
TDP1-210ENST00000554976 CXorf57Q6NSI4 855 aaKnown RBP9.06□□□□□ -0.96
TDP1-210ENST00000554976 KIAA1841Q6NSI8 718 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 TFAP2DQ7Z6R9 452 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 BCAS4Q8TDM0 211 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 NAT9Q9BTE0 207 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 ACE2Q9BYF1 805 aaPredicted RBP9.06□□□□□ -0.96
TDP1-210ENST00000554976 SLC17A6Q9P2U8 582 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 GGA2Q9UJY4 613 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 TBC1D30Q9Y2I9 924 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 ZFP37Q9Y6Q3 630 aaPredicted RBP9.06□□□□□ -0.96
TDP1-210ENST00000554976 MUSKO15146 869 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 SIN3BO75182 1162 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 ARHGEF15O94989 841 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 FGBP02675 491 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 PRKCGP05129 697 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 DNAJB2P25686 324 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 ARNTP27540 789 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 ACVRL1P37023 503 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 CDH4P55283 916 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 YBEYP58557 167 aaPredicted RBP9.06□□□□□ -0.96
TDP1-210ENST00000554976 PPARDQ03181 441 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 SLC10A7Q0GE19 358 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 CAMK1Q14012 370 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 SPOUT1Q5T280 376 aaKnown RBP9.06□□□□□ -0.96
TDP1-210ENST00000554976 CERCAMQ5T4B2 595 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 GAREM2Q75VX8 874 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 LRRC6Q86X45 466 aa9.06□□□□□ -0.96
TDP1-210ENST00000554976 HERC6Q8IVU3 1022 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms