RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 SLC25A18Q9H1K4 315 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 TAOK3Q9H2K8 898 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 SLC22A11Q9NSA0 550 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 OLA1Q9NTK5 396 aaKnown RBP3.4□□□□□ -1.87
SCFD1-213ENST00000554776 TMLHEQ9NVH6 421 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 ORC3Q9UBD5 711 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-213ENST00000554776 FBXO4Q9UKT5 387 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 NAALADL1Q9UQQ1 740 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 GDAQ9Y2T3 454 aa3.4□□□□□ -1.87
SCFD1-213ENST00000554776 FAM90A7PA6NKC0 464 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 FAM90A22PA8MWA6 464 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 FAM90A12PA8MX19 464 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 FAM90A23PA8MXZ1 464 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 TNPO2O14787 897 aaKnown RBP3.39□□□□□ -1.87
SCFD1-213ENST00000554776 WNT1P04628 370 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 IGKV2-30P06310 120 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 TMEM191BP0C7N4 346 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 MAN1A1P33908 653 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 PAFAH1B1P43034 410 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 CPA2P48052 419 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 ARHGAP8P85298 464 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 ALKBH1Q13686 389 aaKnown RBP3.39□□□□□ -1.87
SCFD1-213ENST00000554776 NAA25Q14CX7 972 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 FBXO43Q4G163 708 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 EPHA10Q5JZY3 1008 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 DENND1BQ6P3S1 775 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 FAM57BQ71RH2 274 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 H1FNTQ75WM6 255 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-213ENST00000554776 LRRC8DQ7L1W4 858 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 TMEM200AQ86VY9 491 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 SCN4BQ8IWT1 228 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 FAM47BQ8NA70 645 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 ANKRD52Q8NB46 1076 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 LSM14AQ8ND56 463 aaKnown RBP3.39□□□□□ -1.87
SCFD1-213ENST00000554776 RFFLQ8WZ73 363 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 IP6K1Q92551 441 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 KAT2BQ92831 832 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 ZFYVE19Q96K21 471 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 CHCHD6Q9BRQ6 235 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 TRMOQ9BU70 441 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.39□□□□□ -1.87
SCFD1-213ENST00000554776 PAPOLBQ9NRJ5 636 aaKnown RBP3.39□□□□□ -1.87
SCFD1-213ENST00000554776 PCDHB16Q9NRJ7 776 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 TMEM45AQ9NWC5 275 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 HDAC6Q9UBN7 1215 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 HEY2Q9UBP5 337 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 CNOT7Q9UIV1 285 aaKnown RBP3.39□□□□□ -1.87
SCFD1-213ENST00000554776 SLC25A13Q9UJS0 675 aa3.39□□□□□ -1.87
SCFD1-213ENST00000554776 TTBK1Q5TCY1 1321 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-213ENST00000554776 TRBV5-3A0A0A0MS03 114 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 A0A0G2JK05 382 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 CCDC196A0A1B0GTZ2 297 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 TCRBV7S3A2A0A539 114 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 MCIDASD6RGH6 385 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 F8W810 466 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 TLX3O43711 291 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-213ENST00000554776 BAIAP3O94812 1187 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 BMP15O95972 392 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 CENPBP07199 599 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-213ENST00000554776 LDHCP07864 332 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 CYP19A1P11511 503 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-213ENST00000554776 CYP4B1P13584 511 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 HNF1BP35680 557 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 PSMC2P35998 433 aaKnown RBP3.38□□□□□ -1.87
SCFD1-213ENST00000554776 PTPN9P43378 593 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 HARS2P49590 506 aaKnown RBP3.38□□□□□ -1.87
SCFD1-213ENST00000554776 CCR9P51686 369 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 MVDP53602 400 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 ADPRHP54922 357 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 CDH15P55291 814 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 ZBTB16Q05516 673 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 MTX1Q13505 466 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 SEMA3AQ14563 771 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 IL13RA2Q14627 380 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 ASPHD1Q5U4P2 390 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 ZNF793Q6ZN11 406 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 PCGF5Q86SE9 256 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 ADGRG6Q86SQ4 1221 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 MON1AQ86VX9 555 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 BRSK2Q8IWQ3 736 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.38□□□□□ -1.872e-7■■■■□ 22
SCFD1-213ENST00000554776 CNTROBQ8N137 903 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 ARFGAP1Q8N6T3 406 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 ENDOVQ8N8Q3 282 aaKnown RBP3.38□□□□□ -1.87
SCFD1-213ENST00000554776 TDRD7Q8NHU6 1098 aaKnown RBP3.38□□□□□ -1.87
SCFD1-213ENST00000554776 FAM110DQ8TAY7 271 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-213ENST00000554776 KIF1BPQ96EK5 621 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 VCPIP1Q96JH7 1222 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 ADAD1Q96M93 576 aaKnown RBP3.38□□□□□ -1.87
SCFD1-213ENST00000554776 EYA3Q99504 573 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 CLSTN3Q9BQT9 956 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 FUZQ9BT04 418 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 LMAN2LQ9H0V9 348 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 SLC32A1Q9H598 525 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 ZDHHC7Q9NXF8 308 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 ARL15Q9NXU5 204 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 ALKBH4Q9NXW9 302 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 CD207Q9UJ71 328 aa3.38□□□□□ -1.87
SCFD1-213ENST00000554776 AGO2Q9UKV8 859 aaKnown RBP3.38□□□□□ -1.87
SCFD1-213ENST00000554776 PKP3Q9Y446 797 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms