RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 A0A1B0GTW7 788 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 LRRC72A6NJI9 287 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 C1QTNF3-AMACRE9PGA6 284 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 K7ERQ8 282 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 SMAD6O43541 496 aaKnown RBP10.91□□□□□ -0.66
SHMT2-213ENST00000554600 ATP9BO43861 1147 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 GYPCP04921 128 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 SYPP08247 313 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 TPM1P09493 284 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 C5AR1P21730 350 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 EPHB2P29323 1055 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 ETFBP38117 255 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 OGDHQ02218 1023 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 NRG1Q02297 640 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-213ENST00000554600 TSR1Q2NL82 804 aaKnown RBP10.91□□□□□ -0.66
SHMT2-213ENST00000554600 PPM1JQ5JR12 505 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 PPP1R15BQ5SWA1 713 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 FAM46CQ5VWP2 391 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 HGSNATQ68CP4 663 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 PLEKHA7Q6IQ23 1121 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 RETSATQ6NUM9 610 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-213ENST00000554600 ZNF783Q6ZMS7 281 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 USP30Q70CQ3 517 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 OR14C36Q8NHC7 312 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 FRS2Q8WU20 508 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 SYN2Q92777 582 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-213ENST00000554600 PCED1AQ9H1Q7 454 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 NEUROG2Q9H2A3 272 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 TNKS2Q9H2K2 1166 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 GPATCH2LQ9NWQ4 482 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 SERGEFQ9UGK8 458 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 PCSK1NQ9UHG2 260 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 FZD10Q9ULW2 581 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 HPCAL4Q9UM19 191 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 HS3ST2Q9Y278 367 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 LRRK1Q38SD2 2015 aa10.91□□□□□ -0.66
SHMT2-213ENST00000554600 GOLGA4Q13439 2230 aaKnown RBP10.9□□□□□ -0.66
SHMT2-213ENST00000554600 MED19A0JLT2 244 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-213ENST00000554600 PLK4O00444 970 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 KPNA3O00505 521 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-213ENST00000554600 ARHGAP33O14559 1287 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 BCAT2O15382 392 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-213ENST00000554600 DAPK3O43293 454 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 PRPSAP2O60256 369 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 RAMP2O60895 175 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 MYBL1P10243 752 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 GOT1P17174 413 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 L1CAMP32004 1257 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 ACVRL1P37023 503 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 MAPKAPK2P49137 400 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 VASPP50552 380 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-213ENST00000554600 TPI1P60174 286 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 SCAPQ12770 1279 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 POLD3Q15054 466 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-213ENST00000554600 MANEALQ5VSG8 457 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 PEAR1Q5VY43 1037 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-213ENST00000554600 C22orf39Q6P5X5 142 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 NCEH1Q6PIU2 408 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 RYBPQ8N488 228 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-213ENST00000554600 AADATQ8N5Z0 425 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 OR2I1PQ8NGU4 316 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 PIP4K2CQ8TBX8 421 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 GRIN3AQ8TCU5 1115 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 DNASE2BQ8WZ79 361 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 BIRC7Q96CA5 298 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 TRIM7Q9C029 511 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 DHX35Q9H5Z1 703 aaKnown RBP10.9□□□□□ -0.66
SHMT2-213ENST00000554600 CATSPERBQ9H7T0 1116 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 CAPN10Q9HC96 672 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 MRPL47Q9HD33 250 aaKnown RBP10.9□□□□□ -0.66
SHMT2-213ENST00000554600 DYRK4Q9NR20 520 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 NDFIP2Q9NV92 336 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 TMEM248Q9NWD8 314 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 FZD4Q9ULV1 537 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 AP4E1Q9UPM8 1137 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-213ENST00000554600 BAHCC1Q9P281 2608 aa10.9□□□□□ -0.66
SHMT2-213ENST00000554600 TBC1D3DA0A087WVF3 549 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 TBC1D3IA0A087WXS9 549 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 A0A087X0T9 212 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 TBC1D3EA0A087X179 549 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 TBC1D3KA0A087X1G2 549 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 TBC1D3FA6NER0 549 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-213ENST00000554600 TMEM191CA6NGB0 347 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 TBC1D3LB9A6J9 549 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 EEF2KO00418 725 aaKnown RBP10.89□□□□□ -0.67
SHMT2-213ENST00000554600 MCF2LO15068 1137 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 ALOX15BO15296 676 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 OPHN1O60890 802 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 TBC1D3HP0C7X1 549 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 FAM228BP0C875 321 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 CHRNA3P32297 505 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 SERPINH1P50454 418 aaKnown RBP10.89□□□□□ -0.67
SHMT2-213ENST00000554600 CLCN6P51797 869 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 GALCP54803 685 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 AIF1P55008 147 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 SLC20A2Q08357 652 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 PPP6R3Q5H9R7 873 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-213ENST00000554600 CCDC122Q5T0U0 273 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms