RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 SLC15A2Q16348 729 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF563Q8TA94 476 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 FAM81AQ8TBF8 368 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 HAUS4Q9H6D7 363 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 SHOX2O60902 331 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF189O75820 626 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 PLEKP08567 350 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 GNAT1P11488 350 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 IL10P22301 178 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CXCR2P25025 360 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CDC25BP30305 580 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 TRAP1Q12931 704 aaKnown RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF615Q8N8J6 731 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 TRPV3Q8NET8 790 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 TMEM87BQ96K49 555 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CDADC1Q9BWV3 514 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 PARVAQ9NVD7 372 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 POLR2AP24928 1970 aaKnown RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 SERTM1A2A2V5 107 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 EVPLLA8MZ36 301 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 WRBO00258 174 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 IFNA14P01570 189 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ARP10275 920 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 MFSD10Q14728 455 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 LONRF1Q17RB8 773 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 MTFR2Q6P444 385 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 KLHL5Q96PQ7 755 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ZMYM6O95789 1325 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 C2orf71A6NGG8 1288 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ITGALP20701 1170 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ITGB8P26012 769 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CSTF2P33240 577 aaKnown RBP eCLIP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 GRK5P34947 590 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 PPARGP37231 505 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 KRT76Q01546 638 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CARD17Q5XLA6 110 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 FIGNL1Q6PIW4 674 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 UBE2Q1Q7Z7E8 422 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 MTBPQ96DY7 904 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 LINGO1Q96FE5 620 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 TBC1D23Q9NUY8 699 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CASZ1Q86V15 1759 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CLDN5O00501 218 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CTIFO43310 598 aaKnown RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 HS6ST1O60243 411 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 RPP14O95059 124 aaKnown RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 PDHBP11177 359 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 PGDP52209 483 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 GUCY1A3Q02108 690 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 MYBPHQ13203 477 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 GRIK5Q16478 980 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 BATFQ16520 125 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 NPNTQ6UXI9 565 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 PTPRN2Q92932 1015 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 YIPF4Q9BSR8 244 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 TPSD1Q9BZJ3 242 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 RNF32Q9H0A6 362 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CMTM6Q9NX76 183 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 TP53BP1Q12888 1972 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ITPKAP23677 461 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 HNF4GQ14541 408 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 RFX4Q33E94 735 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ZMYM1Q5SVZ6 1142 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 DGCR6LQ9BY27 220 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CELF4Q9BZC1 486 aaKnown RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 TAS2R14Q9NYV8 317 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 FAM50BQ9Y247 325 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 PCDHB12Q9Y5F1 795 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 GVINP1Q7Z2Y8 2422 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CABIN1Q9Y6J0 2220 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ADAMTS12P58397 1594 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 C17orf102A2RUQ5 167 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 RASA4BC9J798 803 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 RASA4O43374 803 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CBFA2T3O75081 653 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 PDE8BO95263 885 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ETS1P14921 441 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 JUNDP17535 347 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 HSDL1Q3SXM5 330 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 SLC30A9Q6PML9 568 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 MAB21L3Q8N8X9 362 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 GATSQ8NAP1 163 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 TRIB2Q92519 343 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 PHF11Q9UIL8 331 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 IFT52Q9Y366 437 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 NRP1O14786 923 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 BIRC5O15392 142 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 DYRK3O43781 588 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 KPNA6O60684 536 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 NQO1P15559 274 aaKnown RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CXCL9Q07325 125 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 PDIA6Q15084 440 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 TSNQ15631 228 aaKnown RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ZMIZ2Q8NF64 920 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 PPP1R10Q96QC0 940 aaKnown RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 C1orf50Q9BV19 199 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 MCUBQ9NWR8 336 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 MED16Q9Y2X0 877 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms