RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 SYNDIG1Q9H7V2 258 aa17.42■□□□□ 0.38
NEK9-204ENST00000554258 ZNF71Q9NQZ8 489 aaPredicted RBP17.42■□□□□ 0.38
NEK9-204ENST00000554258 ESPL1Q14674 2120 aa17.42■□□□□ 0.38
NEK9-204ENST00000554258 GOLGA6L19H0YKK7 550 aa17.41■□□□□ 0.38
NEK9-204ENST00000554258 MTSS1O43312 755 aa17.41■□□□□ 0.38
NEK9-204ENST00000554258 CCDC130P13994 396 aa17.41■□□□□ 0.38
NEK9-204ENST00000554258 CDK11BP21127 795 aaKnown RBP17.41■□□□□ 0.38
NEK9-204ENST00000554258 C5AR1P21730 350 aa17.41■□□□□ 0.38
NEK9-204ENST00000554258 UGT1A5P35504 534 aa17.41■□□□□ 0.38
NEK9-204ENST00000554258 DCTP40126 519 aa17.41■□□□□ 0.38
NEK9-204ENST00000554258 PDX1P52945 283 aa17.41■□□□□ 0.38
NEK9-204ENST00000554258 COPB1P53618 953 aaKnown RBP17.41■□□□□ 0.38
NEK9-204ENST00000554258 SETMARQ53H47 684 aaPredicted RBP17.41■□□□□ 0.38
NEK9-204ENST00000554258 DCAF17Q5H9S7 520 aaPredicted RBP17.41■□□□□ 0.38
NEK9-204ENST00000554258 KIAA0907Q7Z7F0 614 aaPredicted RBP17.41■□□□□ 0.38
NEK9-204ENST00000554258 FAM217AQ8IXS0 508 aa17.41■□□□□ 0.38
NEK9-204ENST00000554258 CDK5RAP1Q96SZ6 601 aaKnown RBP17.41■□□□□ 0.38
NEK9-204ENST00000554258 XYLT2Q9H1B5 865 aa17.41■□□□□ 0.38
NEK9-204ENST00000554258 NDST4Q9H3R1 872 aa17.41■□□□□ 0.38
NEK9-204ENST00000554258 VRTNQ9H8Y1 702 aa17.41■□□□□ 0.38
NEK9-204ENST00000554258 EPB41L5Q9HCM4 733 aa17.41■□□□□ 0.38
NEK9-204ENST00000554258 CSNK1G1Q9HCP0 422 aa17.41■□□□□ 0.38
NEK9-204ENST00000554258 PCDHB11Q9Y5F2 797 aa17.41■□□□□ 0.38
NEK9-204ENST00000554258 GTPBP10A4D1E9 387 aaKnown RBP17.4■□□□□ 0.38
NEK9-204ENST00000554258 ADH1BP00325 375 aa17.4■□□□□ 0.38
NEK9-204ENST00000554258 ATICP31939 592 aa17.4■□□□□ 0.38
NEK9-204ENST00000554258 PSEN1P49768 467 aa17.4■□□□□ 0.38
NEK9-204ENST00000554258 MXI1P50539 228 aa17.4■□□□□ 0.38
NEK9-204ENST00000554258 TPM4P67936 248 aa17.4■□□□□ 0.38
NEK9-204ENST00000554258 EIF3IQ13347 325 aaKnown RBP17.4■□□□□ 0.38
NEK9-204ENST00000554258 SPIDRQ14159 915 aa17.4■□□□□ 0.38
NEK9-204ENST00000554258 C9orf64Q5T6V5 341 aa17.4■□□□□ 0.38
NEK9-204ENST00000554258 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.4■□□□□ 0.38
NEK9-204ENST00000554258 RAB11FIP2Q7L804 512 aa17.4■□□□□ 0.38
NEK9-204ENST00000554258 RNF214Q8ND24 703 aa17.4■□□□□ 0.38
NEK9-204ENST00000554258 ANKRD20A12PQ8NF67 263 aa17.4■□□□□ 0.38
NEK9-204ENST00000554258 WDR48Q8TAF3 677 aa17.4■□□□□ 0.38
NEK9-204ENST00000554258 C9orf43Q8TAL5 461 aaPredicted RBP17.4■□□□□ 0.38
NEK9-204ENST00000554258 LMO3Q8TAP4 145 aa17.4■□□□□ 0.38
NEK9-204ENST00000554258 SLC2A14Q8TDB8 520 aa17.4■□□□□ 0.38
NEK9-204ENST00000554258 TAS1R2Q8TE23 839 aa17.4■□□□□ 0.38
NEK9-204ENST00000554258 CALN1Q9BXU9 219 aa17.4■□□□□ 0.38
NEK9-204ENST00000554258 TAB2Q9NYJ8 693 aa17.4■□□□□ 0.38
NEK9-204ENST00000554258 MTORP42345 2549 aa17.4■□□□□ 0.38
NEK9-204ENST00000554258 PCNX1Q96RV3 2341 aa17.39■□□□□ 0.38
NEK9-204ENST00000554258 PRRC2CQ9Y520 2896 aaKnown RBP17.39■□□□□ 0.37
NEK9-204ENST00000554258 HIVEP3Q5T1R4 2406 aa17.39■□□□□ 0.37
NEK9-204ENST00000554258 EME2A4GXA9 379 aaPredicted RBP17.39■□□□□ 0.37
NEK9-204ENST00000554258 HLA-DRAP01903 254 aa17.39■□□□□ 0.37
NEK9-204ENST00000554258 COL8A1P27658 744 aa17.39■□□□□ 0.37
NEK9-204ENST00000554258 NCOA4Q13772 614 aa17.39■□□□□ 0.37
NEK9-204ENST00000554258 KRTAP21-3Q3LHN1 58 aa17.39■□□□□ 0.37
NEK9-204ENST00000554258 SCD5Q86SK9 330 aa17.39■□□□□ 0.37
NEK9-204ENST00000554258 ACOT1Q86TX2 421 aa17.39■□□□□ 0.37
NEK9-204ENST00000554258 CREBRFQ8IUR6 639 aa17.39■□□□□ 0.37
NEK9-204ENST00000554258 ZNF276Q8N554 614 aa17.39■□□□□ 0.37
NEK9-204ENST00000554258 FBXL13Q8NEE6 735 aa17.39■□□□□ 0.37
NEK9-204ENST00000554258 TAF4BQ92750 862 aa17.39■□□□□ 0.37
NEK9-204ENST00000554258 SEMA4DQ92854 862 aa17.39■□□□□ 0.37
NEK9-204ENST00000554258 MYO19Q96H55 970 aa17.39■□□□□ 0.37
NEK9-204ENST00000554258 MYOCQ99972 504 aa17.39■□□□□ 0.37
NEK9-204ENST00000554258 RAB20Q9NX57 234 aa17.39■□□□□ 0.37
NEK9-204ENST00000554258 STRIP2Q9ULQ0 834 aa17.39■□□□□ 0.37
NEK9-204ENST00000554258 NAV3Q8IVL0 2385 aa17.39■□□□□ 0.37
NEK9-204ENST00000554258 PDZD2O15018 2839 aa17.39■□□□□ 0.37
NEK9-204ENST00000554258 SDK2Q58EX2 2172 aa17.38■□□□□ 0.37
NEK9-204ENST00000554258 A0A1B0GTH6 734 aa17.38■□□□□ 0.37
NEK9-204ENST00000554258 RIOK3O14730 519 aaKnown RBP17.38■□□□□ 0.37
NEK9-204ENST00000554258 CASC3O15234 703 aaKnown RBP17.38■□□□□ 0.37
NEK9-204ENST00000554258 NVLO15381 856 aaKnown RBP17.38■□□□□ 0.37
NEK9-204ENST00000554258 PHACTR2O75167 634 aa17.38■□□□□ 0.37
NEK9-204ENST00000554258 ASS1P00966 412 aaKnown RBP17.38■□□□□ 0.37
NEK9-204ENST00000554258 CD70P32970 193 aa17.38■□□□□ 0.37
NEK9-204ENST00000554258 UQCRFS1P47985 274 aa17.38■□□□□ 0.37
NEK9-204ENST00000554258 MYL6P60660 151 aa17.38■□□□□ 0.37
NEK9-204ENST00000554258 FANCCQ00597 558 aa17.38■□□□□ 0.37
NEK9-204ENST00000554258 BIRC3Q13489 604 aa17.38■□□□□ 0.37
NEK9-204ENST00000554258 DRAP1Q14919 205 aaPredicted RBP17.38■□□□□ 0.37
NEK9-204ENST00000554258 NR0B2Q15466 257 aa17.38■□□□□ 0.37
NEK9-204ENST00000554258 SGSM1Q2NKQ1 1148 aa17.38■□□□□ 0.37
NEK9-204ENST00000554258 ZNF542PQ5EBM4 170 aa17.38■□□□□ 0.37
NEK9-204ENST00000554258 PERM1Q5SV97 790 aa17.38■□□□□ 0.37
NEK9-204ENST00000554258 DPY19L2P1Q6NXN4 242 aa17.38■□□□□ 0.37
NEK9-204ENST00000554258 TRIM69Q86WT6 500 aa17.38■□□□□ 0.37
NEK9-204ENST00000554258 EHBP1Q8NDI1 1231 aa17.38■□□□□ 0.37
NEK9-204ENST00000554258 TMA16Q96EY4 203 aaKnown RBP17.38■□□□□ 0.37
NEK9-204ENST00000554258 FAXDC2Q96IV6 333 aa17.38■□□□□ 0.37
NEK9-204ENST00000554258 VPS16Q9H269 839 aa17.38■□□□□ 0.37
NEK9-204ENST00000554258 SMYD3Q9H7B4 428 aa17.38■□□□□ 0.37
NEK9-204ENST00000554258 RTN4Q9NQC3 1192 aaKnown RBP17.38■□□□□ 0.37
NEK9-204ENST00000554258 DNAJC28Q9NX36 388 aa17.38■□□□□ 0.37
NEK9-204ENST00000554258 CLIC5Q9NZA1 410 aa17.38■□□□□ 0.37
NEK9-204ENST00000554258 MARCH2Q9P0N8 246 aa17.38■□□□□ 0.37
NEK9-204ENST00000554258 UNC13CQ8NB66 2214 aa17.37■□□□□ 0.37
NEK9-204ENST00000554258 LGALS16A8MUM7 142 aa17.37■□□□□ 0.37
NEK9-204ENST00000554258 MUSKO15146 869 aa17.37■□□□□ 0.37
NEK9-204ENST00000554258 IL1BP01584 269 aa17.37■□□□□ 0.37
NEK9-204ENST00000554258 KRT7P08729 469 aa17.37■□□□□ 0.37
NEK9-204ENST00000554258 JMJD7P0C870 316 aa17.37■□□□□ 0.37
NEK9-204ENST00000554258 FAM200BP0CF97 657 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms