RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 LRRC4Q9HBW1 653 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 OXSMQ9NWU1 459 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 ARHGAP26Q9UNA1 814 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 IPPQ9Y573 584 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 TIMM13Q9Y5L4 95 aaPredicted RBP7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 CDY2AQ9Y6F7 541 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 CDY1Q9Y6F8 540 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 CEP350Q5VT06 3117 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 CAPN8A6NHC0 703 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 TMEM114B3SHH9 223 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 STX16-NPEPL1H3BU86 382 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 MATN2O00339 956 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 TRIM13O60858 407 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 PIGNO95427 931 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 CD4P01730 458 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 SLC35E2BP0CK96 405 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 KCNE1P15382 129 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 XRCC1P18887 633 aaPredicted RBP7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 GRIA4P48058 902 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 RAB27AP51159 221 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 ATXN3P54252 364 aaPredicted RBP7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 ROR2Q01974 943 aaKnown RBP7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 GALNT2Q10471 571 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 R3HDM1Q15032 1099 aaKnown RBP7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 DGKDQ16760 1214 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 CNPY1Q3B7I2 92 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 LSM12Q3MHD2 195 aaKnown RBP7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 XKR4Q5GH76 650 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 ARL13AQ5H913 290 aaPredicted RBP7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 TSTD2Q5T7W7 516 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 FASTKD5Q7L8L6 764 aaKnown RBP7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 ZC3HC1Q86WB0 502 aaKnown RBP7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 SLC41A1Q8IVJ1 513 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 LSMEM2Q8N112 164 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 RNF148Q8N7C7 305 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 CNTD1Q8N815 330 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 GPRC5AQ8NFJ5 357 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 SPATA22Q8NHS9 363 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 ZSCAN18Q8TBC5 510 aaPredicted RBP7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 RCN3Q96D15 328 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 MAML3Q96JK9 1138 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 CATSPER2Q96P56 530 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 RTKNQ9BST9 563 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 ZNF385DQ9H6B1 395 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 TASP1Q9H6P5 420 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 DDIT4Q9NX09 232 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 BFARQ9NZS9 450 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 ZDHHC2Q9UIJ5 367 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 INPP5FQ9Y2H2 1132 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 TBC1D30Q9Y2I9 924 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 MYBPHLA2RUH7 354 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 CASQ2O14958 399 aaPredicted RBP7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 TREHO43280 583 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 AP1G2O75843 785 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 FBXO21O94952 628 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 PGK1P00558 417 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 MPOP05164 745 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 SPATA31D3P0C874 917 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 NCAM1P13591 858 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 UQCRBP14927 111 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 PRDX6P30041 224 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 PKNOX1P55347 436 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 CCNA1P78396 465 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 MRPS22P82650 360 aaKnown RBP7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 SATB1Q01826 763 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 SCAPQ12770 1279 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 PDCD2Q16342 344 aaPredicted RBP7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 GRAMD1BQ3KR37 738 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 LIN52Q52LA3 116 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 PRAMEF19Q5SWL8 479 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 ZNF280DQ6N043 979 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 ZYG11AQ6WRX3 759 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 SPATA31D4Q6ZUB0 917 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 FAM35AQ86V20 835 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 CEP97Q8IW35 865 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 DENND6AQ8IWF6 608 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 KCTD13Q8WZ19 329 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 USP13Q92995 863 aaPredicted RBP7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 NTAN1Q96AB6 310 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 HDAC11Q96DB2 347 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 GCNAQ96QF7 691 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 GPR22Q99680 433 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 APBA2Q99767 749 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 FTHL17Q9BXU8 183 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 ZCWPW1Q9H0M4 648 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 FAM96AQ9H5X1 160 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 NEU3Q9UQ49 428 aa7.05□□□□□ -1.28
LINC-ROR-201ENST00000553704 A0A1B0GVG6 124 aa7.04□□□□□ -1.28
LINC-ROR-201ENST00000553704 MBLAC1A4D2B0 266 aaPredicted RBP7.04□□□□□ -1.28
LINC-ROR-201ENST00000553704 TXNDC9O14530 226 aa7.04□□□□□ -1.28
LINC-ROR-201ENST00000553704 LRIG2O94898 1065 aa7.04□□□□□ -1.28
LINC-ROR-201ENST00000553704 OR6B1O95007 311 aa7.04□□□□□ -1.28
LINC-ROR-201ENST00000553704 MT-CYBP00156 380 aaPredicted RBP7.04□□□□□ -1.28
LINC-ROR-201ENST00000553704 F2P00734 622 aa7.04□□□□□ -1.28
LINC-ROR-201ENST00000553704 JCHAINP01591 159 aa7.04□□□□□ -1.28
LINC-ROR-201ENST00000553704 FAM200BP0CF97 657 aa7.04□□□□□ -1.28
LINC-ROR-201ENST00000553704 SMIM18P0DKX4 95 aa7.04□□□□□ -1.28
LINC-ROR-201ENST00000553704 VCLP18206 1134 aa7.04□□□□□ -1.28
LINC-ROR-201ENST00000553704 PNPLA4P41247 253 aa7.04□□□□□ -1.28
LINC-ROR-201ENST00000553704 NAGLUP54802 743 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms