RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 TRIM59Q8IWR1 403 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 DEFB106AQ8N104 65 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 SPATA20Q8TB22 786 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 STK32AQ8WU08 396 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 ZNF606Q8WXB4 792 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 PPP1R13BQ96KQ4 1090 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 LMLNQ96KR4 655 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 KREMEN1Q96MU8 473 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 MYOCQ99972 504 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 SIK2Q9H0K1 926 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 VANGL2Q9ULK5 521 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 DMTF1Q9Y222 760 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 PAXBP1Q9Y5B6 917 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 ANKRD36A6QL64 1941 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 PES1O00541 588 aaKnown RBP10.18□□□□□ -0.78
ACTN1-208ENST00000553370 ALOX15BO15296 676 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 CAPNS1P04632 268 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 CCNYL3P0C7X3 344 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 ALPPL2P10696 532 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 KRT9P35527 623 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 GGCXP38435 758 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 MTIF2P46199 727 aaKnown RBP10.18□□□□□ -0.78
ACTN1-208ENST00000553370 CLDN6P56747 220 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 CNTN1Q12860 1018 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 DLG2Q15700 870 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 LRRC31Q6UY01 552 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 C11orf57Q6ZUT1 292 aaPredicted RBP10.18□□□□□ -0.78
ACTN1-208ENST00000553370 DEPDC4Q8N2C3 294 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 MFSD2AQ8NA29 543 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 ATP11CQ8NB49 1132 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 LMO3Q8TAP4 145 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 SAP25Q8TEE9 199 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 PTPRN2Q92932 1015 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 KLHDC7BQ96G42 594 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 FAM129BQ96TA1 746 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 ORAI3Q9BRQ5 295 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 C2orf49Q9BVC5 232 aaPredicted RBP10.18□□□□□ -0.78
ACTN1-208ENST00000553370 CALN1Q9BXU9 219 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 KRTAP3-3Q9BYR6 98 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 KRTAP3-2Q9BYR7 98 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 EVA1BQ9NVM1 165 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 CYTH4Q9UIA0 394 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 STAP1Q9ULZ2 295 aa10.18□□□□□ -0.78
ACTN1-208ENST00000553370 COL6A6A6NMZ7 2263 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 SETXQ7Z333 2677 aaKnown RBP10.17□□□□□ -0.78
ACTN1-208ENST00000553370 FLNBO75369 2602 aaKnown RBP10.17□□□□□ -0.78
ACTN1-208ENST00000553370 A0A1W2PR77 199 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 PRAMEF26H0Y7S4 382 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 M0QYT0 321 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 FFAR2O15552 330 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 PLRG1O43660 514 aaKnown RBP10.17□□□□□ -0.78
ACTN1-208ENST00000553370 RNGTTO60942 597 aaKnown RBP10.17□□□□□ -0.78
ACTN1-208ENST00000553370 CLDN11O75508 207 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 DAB1O75553 588 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 DKK1O94907 266 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 PCDH8O95206 1070 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 ADCY5O95622 1261 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 GLI1P08151 1106 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 PRLRP16471 622 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 GLDCP23378 1020 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 AKT2P31751 481 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 DRD3P35462 400 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 ACADVLP49748 655 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 RNASE9P60153 205 aaKnown RBP10.17□□□□□ -0.78
ACTN1-208ENST00000553370 PITX1P78337 314 aaPredicted RBP10.17□□□□□ -0.78
ACTN1-208ENST00000553370 OVGP1Q12889 678 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 BNIP3Q12983 259 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 TARDBPQ13148 414 aaKnown RBP eCLIP10.17□□□□□ -0.78
ACTN1-208ENST00000553370 ILKQ13418 452 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 AUHQ13825 339 aaKnown RBP10.17□□□□□ -0.78
ACTN1-208ENST00000553370 MORC3Q14149 939 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 TAF5Q15542 800 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 EXOC3L4Q17RC7 722 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 MSS51Q4VC12 460 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 SOWAHCQ53LP3 525 aaPredicted RBP10.17□□□□□ -0.78
ACTN1-208ENST00000553370 FBXL22Q6P050 247 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 GJB7Q6PEY0 223 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 TRIM65Q6PJ69 517 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 FAM183BPQ6ZVS7 135 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 PTAR1Q7Z6K3 402 aaPredicted RBP10.17□□□□□ -0.78
ACTN1-208ENST00000553370 TMEM110Q86TL2 294 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 IQCHQ86VS3 1027 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 TRIM69Q86WT6 500 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 MSANTD4Q8NCY6 345 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 C1orf131Q8NDD1 294 aaKnown RBP10.17□□□□□ -0.78
ACTN1-208ENST00000553370 FAM174AQ8TBP5 190 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 GRIN3AQ8TCU5 1115 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 KLK6Q92876 244 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 PPP1R16AQ96I34 528 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 ERVMER34-1Q9H9K5 563 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 EBF2Q9HAK2 575 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 PREBQ9HCU5 417 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 ACP6Q9NPH0 428 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 ASNSD1Q9NWL6 643 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 APEX2Q9UBZ4 518 aa10.17□□□□□ -0.78
ACTN1-208ENST00000553370 WNT9AO14904 365 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 SLC31A1O15431 190 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 LATO43561 262 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 PAGE1O75459 146 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 IGLV3-25P01717 112 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms