RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 TAS2R50P59544 299 aa5.25□□□□□ -1.57
ATXN3-217ENST00000553287 PTK2BQ14289 1009 aa5.25□□□□□ -1.57
ATXN3-217ENST00000553287 PRTGQ2VWP7 1150 aa5.25□□□□□ -1.57
ATXN3-217ENST00000553287 TBC1D3GQ6DHY5 549 aa5.25□□□□□ -1.57
ATXN3-217ENST00000553287 TBC1D3CQ6IPX1 549 aa5.25□□□□□ -1.57
ATXN3-217ENST00000553287 PGBD2Q6P3X8 592 aa5.25□□□□□ -1.57
ATXN3-217ENST00000553287 TMEM88Q6PEY1 159 aa5.25□□□□□ -1.57
ATXN3-217ENST00000553287 SMIM5Q71RC9 77 aa5.25□□□□□ -1.57
ATXN3-217ENST00000553287 TBC1D3Q8IZP1 549 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-217ENST00000553287 EXD3Q8N9H8 876 aa5.25□□□□□ -1.57
ATXN3-217ENST00000553287 ZNF527Q8NB42 609 aa5.25□□□□□ -1.57
ATXN3-217ENST00000553287 TMEM174Q8WUU8 243 aa5.25□□□□□ -1.57
ATXN3-217ENST00000553287 CENPIQ92674 756 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-217ENST00000553287 CDK19Q9BWU1 502 aa5.25□□□□□ -1.57
ATXN3-217ENST00000553287 OSBPL5Q9H0X9 879 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-217ENST00000553287 MLXIPQ9HAP2 919 aa5.25□□□□□ -1.57
ATXN3-217ENST00000553287 FZD3Q9NPG1 666 aa5.25□□□□□ -1.57
ATXN3-217ENST00000553287 LRCH1Q9Y2L9 728 aa5.25□□□□□ -1.57
ATXN3-217ENST00000553287 COL18A1P39060 1754 aa5.24□□□□□ -1.57
ATXN3-217ENST00000553287 ARHGEF28Q8N1W1 1705 aaKnown RBP5.24□□□□□ -1.57
ATXN3-217ENST00000553287 CYP3A7-CYP3A51PA0A087WV96 503 aa5.24□□□□□ -1.57
ATXN3-217ENST00000553287 A0A0G2JK05 382 aa5.24□□□□□ -1.57
ATXN3-217ENST00000553287 C3orf70A6NLC5 250 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-217ENST00000553287 RHODO00212 210 aa5.24□□□□□ -1.57
ATXN3-217ENST00000553287 ALPLP05186 524 aa5.24□□□□□ -1.57
ATXN3-217ENST00000553287 CHRNB1P11230 501 aa5.24□□□□□ -1.57
ATXN3-217ENST00000553287 CYP3A7P24462 503 aa5.24□□□□□ -1.57
ATXN3-217ENST00000553287 SERPINB3P29508 390 aa5.24□□□□□ -1.57
ATXN3-217ENST00000553287 PTGR1Q14914 329 aa5.24□□□□□ -1.57
ATXN3-217ENST00000553287 KIAA1755Q5JYT7 1200 aa5.24□□□□□ -1.57
ATXN3-217ENST00000553287 C6orf10Q5SRN2 563 aa5.24□□□□□ -1.57
ATXN3-217ENST00000553287 SYCP2LQ5T4T6 812 aa5.24□□□□□ -1.57
ATXN3-217ENST00000553287 DAB2IPQ5VWQ8 1189 aa5.24□□□□□ -1.57
ATXN3-217ENST00000553287 NUGGCQ68CJ6 796 aa5.24□□□□□ -1.57
ATXN3-217ENST00000553287 LRIG3Q6UXM1 1119 aa5.24□□□□□ -1.57
ATXN3-217ENST00000553287 RFX8Q6ZV50 586 aa5.24□□□□□ -1.57
ATXN3-217ENST00000553287 BHLHA9Q7RTU4 235 aa5.24□□□□□ -1.57
ATXN3-217ENST00000553287 PAQR4Q8N4S7 273 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-217ENST00000553287 TMEM199Q8N511 208 aa5.24□□□□□ -1.57
ATXN3-217ENST00000553287 FAM71BQ8TC56 605 aa5.24□□□□□ -1.57
ATXN3-217ENST00000553287 HMGB4Q8WW32 186 aa5.24□□□□□ -1.57
ATXN3-217ENST00000553287 WDR83Q9BRX9 315 aaKnown RBP5.24□□□□□ -1.57
ATXN3-217ENST00000553287 NHSQ6T4R5 1651 aa5.24□□□□□ -1.57
ATXN3-217ENST00000553287 A6NNC1 897 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 LGALS16A8MUM7 142 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 KRTAP29-1A8MX34 341 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-217ENST00000553287 TNFRSF6BO95407 300 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 LARGE1O95461 756 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 TOMM40O96008 361 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 SETSIPP0DME0 302 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 TKTP29401 623 aaKnown RBP5.23□□□□□ -1.57
ATXN3-217ENST00000553287 FAM3BP58499 235 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-217ENST00000553287 GAD2Q05329 585 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 RNASELQ05823 741 aaKnown RBP5.23□□□□□ -1.57
ATXN3-217ENST00000553287 SF3A3Q12874 501 aaKnown RBP eCLIP5.23□□□□□ -1.57
ATXN3-217ENST00000553287 RAPGEF1Q13905 1077 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 PFKFB4Q16877 469 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 C10orf76Q5T2E6 689 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 ATPAF1Q5TC12 328 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-217ENST00000553287 TTLL5Q6EMB2 1281 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 ZNF549Q6P9A3 640 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 C9orf47Q6ZRZ4 202 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 CYB5R4Q7L1T6 521 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 MORC1Q86VD1 984 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 DDIASQ8IXT1 998 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 OR1N1Q8NGS0 311 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 CLEC4CQ8WTT0 213 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 RSC1A1Q92681 617 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 ATP2A3Q93084 1043 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 ADAD1Q96M93 576 aaKnown RBP5.23□□□□□ -1.57
ATXN3-217ENST00000553287 CAMK1GQ96NX5 476 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 SORBS1Q9BX66 1292 aaKnown RBP5.23□□□□□ -1.57
ATXN3-217ENST00000553287 CNTN6Q9UQ52 1028 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 TNFSF13BQ9Y275 285 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 CPDO75976 1380 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 MAP3K5Q99683 1374 aa5.23□□□□□ -1.57
ATXN3-217ENST00000553287 KAT6BQ8WYB5 2073 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 PIK3C2AO00443 1686 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 POLR3AO14802 1390 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-217ENST00000553287 A0A087WV62 115 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 FAM90A18PA6NE21 464 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 FAM90A16PA6NEW6 464 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 FAM90A9PA6NNJ1 464 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 FAM90A5PA8MXJ8 464 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 FAM90A15PP0C7V4 464 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 FAM90A14PP0C7W9 464 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 GYS1P13807 737 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 BTBD16Q32M84 506 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 TTC39AQ5SRH9 613 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 HMBOX1Q6NT76 420 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 TOGARAM2Q6ZUX3 1019 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 TRAPPC11Q7Z392 1133 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 CCDC146Q8IYE0 955 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 IP6K1Q92551 441 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 KAT2AQ92830 837 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 CLMNQ96JQ2 1002 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 WDR12Q9GZL7 423 aaKnown RBP5.22□□□□□ -1.57
ATXN3-217ENST00000553287 BRD8Q9H0E9 1235 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 ZNF700Q9H0M5 742 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 TXNRD2Q9NNW7 524 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms