RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 ZNF212Q9UDV6 495 aa16.27■□□□□ 0.2
CDK4-215ENST00000553237 OR12D3Q9UGF7 316 aa16.27■□□□□ 0.2
CDK4-215ENST00000553237 PCOLCE2Q9UKZ9 415 aa16.27■□□□□ 0.2
CDK4-215ENST00000553237 FARP1Q9Y4F1 1045 aaPredicted RBP16.27■□□□□ 0.2
CDK4-215ENST00000553237 ILVBLA1L0T0 632 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 C1QTNF9BB2RNN3 333 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 FAM72CH0Y354 149 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 VILLO15195 856 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 CBFA2T3O75081 653 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 CALB1P05937 261 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 CTSLP07711 333 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 C1QTNF9P0C862 333 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 GPD1P21695 349 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 CHRNA3P32297 505 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 CTSKP43235 329 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 PTPN9P43378 593 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 HDAC4P56524 1084 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 IL9RQ01113 521 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 IQCB1Q15051 598 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 FAM72AQ5TYM5 149 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 FAM72DQ6L9T8 149 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 RWDD4Q6NW29 188 aaKnown RBP16.26■□□□□ 0.19
CDK4-215ENST00000553237 WDR59Q6PJI9 974 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 FAM72BQ86X60 149 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 PHF13Q86YI8 300 aaPredicted RBP16.26■□□□□ 0.19
CDK4-215ENST00000553237 CCDC185Q8N715 623 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 PNPLA1Q8N8W4 532 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 CHST14Q8NCH0 376 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 OR2A12Q8NGT7 310 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 RHBDD1Q8TEB9 315 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 FAM172AQ8WUF8 416 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 SERAC1Q96JX3 654 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 TNKS2Q9H2K2 1166 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 ATP13A1Q9HD20 1204 aa16.26■□□□□ 0.19
CDK4-215ENST00000553237 PPARGC1AQ9UBK2 798 aaKnown RBP16.26■□□□□ 0.19
CDK4-215ENST00000553237 C10orf142B7Z368 130 aa16.25■□□□□ 0.19
CDK4-215ENST00000553237 RNF103O00237 685 aa16.25■□□□□ 0.19
CDK4-215ENST00000553237 ALOX15BO15296 676 aa16.25■□□□□ 0.19
CDK4-215ENST00000553237 FERP16591 822 aa16.25■□□□□ 0.19
CDK4-215ENST00000553237 CD38P28907 300 aa16.25■□□□□ 0.19
CDK4-215ENST00000553237 GNA12Q03113 381 aa16.25■□□□□ 0.19
CDK4-215ENST00000553237 SUZ12Q15022 739 aaKnown RBP16.25■□□□□ 0.19
CDK4-215ENST00000553237 ZSCAN23Q3MJ62 389 aa16.25■□□□□ 0.19
CDK4-215ENST00000553237 AGBL4Q5VU57 503 aa16.25■□□□□ 0.19
CDK4-215ENST00000553237 MON1BQ7L1V2 547 aa16.25■□□□□ 0.19
CDK4-215ENST00000553237 STRADAQ7RTN6 431 aa16.25■□□□□ 0.19
CDK4-215ENST00000553237 PRPF39Q86UA1 669 aaKnown RBP16.25■□□□□ 0.19
CDK4-215ENST00000553237 CENPIQ92674 756 aaPredicted RBP16.25■□□□□ 0.19
CDK4-215ENST00000553237 OSBPL2Q9H1P3 480 aa16.25■□□□□ 0.19
CDK4-215ENST00000553237 RTN4Q9NQC3 1192 aaKnown RBP16.25■□□□□ 0.19
CDK4-215ENST00000553237 NDFIP2Q9NV92 336 aa16.25■□□□□ 0.19
CDK4-215ENST00000553237 KLK13Q9UKR3 277 aa16.25■□□□□ 0.19
CDK4-215ENST00000553237 BTBD3Q9Y2F9 522 aa16.25■□□□□ 0.19
CDK4-215ENST00000553237 PCDHGB2Q9Y5G2 931 aa16.25■□□□□ 0.19
CDK4-215ENST00000553237 ACTL7AQ9Y615 435 aa16.25■□□□□ 0.19
CDK4-215ENST00000553237 CACNA1BQ00975 2339 aa16.25■□□□□ 0.19
CDK4-215ENST00000553237 CABIN1Q9Y6J0 2220 aa16.25■□□□□ 0.19
CDK4-215ENST00000553237 SIGLEC16A6NMB1 481 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 KPNA3O00505 521 aaPredicted RBP16.24■□□□□ 0.19
CDK4-215ENST00000553237 FLRT2O43155 660 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 SLC7A4O43246 635 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 PLRG1O43660 514 aaKnown RBP16.24■□□□□ 0.19
CDK4-215ENST00000553237 ZMPSTE24O75844 475 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 KRT37O76014 449 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 PLEKP08567 350 aaPredicted RBP16.24■□□□□ 0.19
CDK4-215ENST00000553237 FTH1P19P0C7X4 201 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 ACVRL1P37023 503 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 DNA2P51530 1060 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 CLCN6P51797 869 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 GSCP56915 257 aaPredicted RBP16.24■□□□□ 0.19
CDK4-215ENST00000553237 ZNF423Q2M1K9 1284 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 ARSIQ5FYB1 569 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 MANEALQ5VSG8 457 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 RETSATQ6NUM9 610 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 DNAJC24Q6P3W2 148 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 SCYL2Q6P3W7 929 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 C22orf39Q6P5X5 142 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 UNQ6494/PRO21346Q6UXR6 183 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 ZNF783Q6ZMS7 281 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 DBX2Q6ZNG2 339 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 IRF2BP2Q7Z5L9 587 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 SLCO6A1Q86UG4 719 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 C3orf20Q8ND61 904 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 FAM131CQ96AQ9 280 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 ARRDC3Q96B67 414 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 SKA1Q96BD8 255 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 CCDC114Q96M63 670 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 CBX8Q9HC52 389 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 ARHGAP20Q9P2F6 1191 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 DNAI1Q9UI46 699 aa16.24■□□□□ 0.19
CDK4-215ENST00000553237 PLXNA2O75051 1894 aa16.23■□□□□ 0.19
CDK4-215ENST00000553237 NYNRINQ9P2P1 1898 aaKnown RBP16.23■□□□□ 0.19
CDK4-215ENST00000553237 A0A1W2PR77 199 aa16.23■□□□□ 0.19
CDK4-215ENST00000553237 GOLGA8CPA6NN73 597 aa16.23■□□□□ 0.19
CDK4-215ENST00000553237 TMCO5BA8MYB1 307 aa16.23■□□□□ 0.19
CDK4-215ENST00000553237 LATO43561 262 aa16.23■□□□□ 0.19
CDK4-215ENST00000553237 LRIG2O94898 1065 aa16.23■□□□□ 0.19
CDK4-215ENST00000553237 TRIM16O95361 564 aa16.23■□□□□ 0.19
CDK4-215ENST00000553237 CCDC172P0C7W6 258 aa16.23■□□□□ 0.19
CDK4-215ENST00000553237 RHOQP17081 205 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms