RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, human

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO1-222	ENST00000553154	TP53INP2	Q8IXH6	220 aa		10.34	□□□□□ -0.75
CALCOCO1-222	ENST00000553154	FAM160A2	Q8N612	972 aa	Predicted RBP	10.34	□□□□□ -0.75
CALCOCO1-222	ENST00000553154	ACRBP	Q8NEB7	543 aa		10.34	□□□□□ -0.75
CALCOCO1-222	ENST00000553154	OR2A12	Q8NGT7	310 aa		10.34	□□□□□ -0.75
CALCOCO1-222	ENST00000553154	RLN3	Q8WXF3	142 aa		10.34	□□□□□ -0.75
CALCOCO1-222	ENST00000553154	NKD2	Q969F2	451 aa	Predicted RBP	10.34	□□□□□ -0.75
CALCOCO1-222	ENST00000553154	ERLEC1	Q96DZ1	483 aa		10.34	□□□□□ -0.75
CALCOCO1-222	ENST00000553154	CEP44	Q9C0F1	390 aa		10.34	□□□□□ -0.75
CALCOCO1-222	ENST00000553154	MUC3B	Q9H195	1237 aa		10.34	□□□□□ -0.75
CALCOCO1-222	ENST00000553154	CATSPERB	Q9H7T0	1116 aa		10.34	□□□□□ -0.75
CALCOCO1-222	ENST00000553154	ZWILCH	Q9H900	591 aa		10.34	□□□□□ -0.75
CALCOCO1-222	ENST00000553154	ATP13A1	Q9HD20	1204 aa		10.34	□□□□□ -0.75
CALCOCO1-222	ENST00000553154	ETNK2	Q9NVF9	386 aa		10.34	□□□□□ -0.75
CALCOCO1-222	ENST00000553154	SUN2	Q9UH99	717 aa		10.34	□□□□□ -0.75
CALCOCO1-222	ENST00000553154	NYNRIN	Q9P2P1	1898 aa	Known RBP	10.34	□□□□□ -0.75
CALCOCO1-222	ENST00000553154	OTOGL	Q3ZCN5	2332 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154		H3BRJ5	948 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	MCF2L	O15068	1137 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	ALOX15B	O15296	676 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	SYNCRIP	O60506	623 aa	Known RBP	10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	PRAMEF11	O60813	436 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	ZNF217	O75362	1048 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	EPN2	O95208	641 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	LMNA	P02545	664 aa	Known RBP	10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	CTSL	P07711	333 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	DRD3	P35462	400 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	TPMT	P51580	245 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	VAV2	P52735	878 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	METAP1	P53582	386 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	GSDMD	P57764	484 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	ST8SIA6	P61647	398 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	KRT83	P78385	493 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	CCZ1B	P86790	482 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	CCZ1	P86791	482 aa	Predicted RBP	10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	SLC20A2	Q08357	652 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	MMRN1	Q13201	1228 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	SIM2	Q14190	667 aa	Predicted RBP	10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	MESD	Q14696	234 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	DLG2	Q15700	870 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	PPP6R3	Q5H9R7	873 aa	Predicted RBP	10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	PEAR1	Q5VY43	1037 aa	Predicted RBP	10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	ZNF776	Q68DI1	518 aa	Predicted RBP	10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	LAIR1	Q6GTX8	287 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	RETSAT	Q6NUM9	610 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	PLPP6	Q8IY26	295 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	STK40	Q8N2I9	435 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	AADAT	Q8N5Z0	425 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	PQLC3	Q8N755	202 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	LRRC57	Q8N9N7	239 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	PCDH19	Q8TAB3	1148 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	RAPGEF5	Q92565	580 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	HSPH1	Q92598	858 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	ISG20	Q96AZ6	181 aa	Known RBP	10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	ZNF419	Q96HQ0	510 aa	Predicted RBP	10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	LOXL4	Q96JB6	756 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	ZNF670	Q9BS34	389 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	SLC39A8	Q9C0K1	460 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	PABPC3	Q9H361	631 aa	Known RBP	10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	GOLPH3	Q9H4A6	298 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	PRDM16	Q9HAZ2	1276 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	WSB2	Q9NYS7	404 aa	Predicted RBP	10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	SERGEF	Q9UGK8	458 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	SLC25A13	Q9UJS0	675 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	SARDH	Q9UL12	918 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	PPM1H	Q9ULR3	514 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	DUSP10	Q9Y6W6	482 aa		10.33	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	CBX4	O00257	560 aa		10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	COMT	P21964	271 aa		10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	AMPD1	P23109	780 aa		10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	SLC1A1	P43005	524 aa		10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	POLD3	Q15054	466 aa	Predicted RBP	10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	PAFAH1B3	Q15102	231 aa	Known RBP	10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	PDK2	Q15119	407 aa		10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	SPA17	Q15506	151 aa		10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	CST6	Q15828	149 aa		10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	USP39	Q53GS9	565 aa	Known RBP	10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	INO80D	Q53TQ3	878 aa	Predicted RBP	10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	PLA2G2C	Q5R387	149 aa		10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	NCBP2-AS2	Q69YL0	99 aa		10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	ARHGAP36	Q6ZRI8	547 aa		10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	USP30	Q70CQ3	517 aa		10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	C11orf74	Q86VG3	221 aa		10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	SLC41A1	Q8IVJ1	513 aa		10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	PCDH20	Q8N6Y1	951 aa	Known RBP	10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	TPCN2	Q8NHX9	752 aa		10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	PRCC	Q92733	491 aa	Predicted RBP	10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	SIPA1	Q96FS4	1042 aa		10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	DESI2	Q9BSY9	194 aa		10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	SPON2	Q9BUD6	331 aa		10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	PARD6A	Q9NPB6	346 aa		10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	KLHL11	Q9NVR0	708 aa		10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	BCCIP	Q9P287	314 aa	Known RBP eCLIP	10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	LHX3	Q9UBR4	397 aa		10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	INVS	Q9Y283	1065 aa		10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	WASF2	Q9Y6W5	498 aa		10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	ATG2B	Q96BY7	2078 aa		10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	EP300	Q09472	2414 aa	Predicted RBP	10.32	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	TNRC6B	Q9UPQ9	1833 aa	Known RBP	10.31	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	MYO18A	Q92614	2054 aa	Known RBP	10.31	□□□□□ -0.76
CALCOCO1-222	ENST00000553154	GRID2IP	A4D2P6	1211 aa		10.31	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms