RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 BUB1O43683 1085 aa14.42□□□□□ -0.1
PTCH1-226ENST00000553011 CD160O95971 181 aa14.42□□□□□ -0.1
PTCH1-226ENST00000553011 KRT7P08729 469 aa14.42□□□□□ -0.1
PTCH1-226ENST00000553011 TNNT1P13805 278 aa14.42□□□□□ -0.1
PTCH1-226ENST00000553011 COMTP21964 271 aa14.42□□□□□ -0.1
PTCH1-226ENST00000553011 IL4RP24394 825 aa14.42□□□□□ -0.1
PTCH1-226ENST00000553011 PLA2G5P39877 138 aa14.42□□□□□ -0.1
PTCH1-226ENST00000553011 SERPINH1P50454 418 aaKnown RBP14.42□□□□□ -0.1
PTCH1-226ENST00000553011 YBEYP58557 167 aaPredicted RBP14.42□□□□□ -0.1
PTCH1-226ENST00000553011 RPS14P62263 151 aaKnown RBP14.42□□□□□ -0.1
PTCH1-226ENST00000553011 RETSATQ6NUM9 610 aa14.42□□□□□ -0.1
PTCH1-226ENST00000553011 Q6ZVU0 165 aa14.42□□□□□ -0.1
PTCH1-226ENST00000553011 KIAA1328Q86T90 577 aa14.42□□□□□ -0.1
PTCH1-226ENST00000553011 KBTBD6Q86V97 674 aa14.42□□□□□ -0.1
PTCH1-226ENST00000553011 ARHGAP12Q8IWW6 846 aa14.42□□□□□ -0.1
PTCH1-226ENST00000553011 STK40Q8N2I9 435 aa14.42□□□□□ -0.1
PTCH1-226ENST00000553011 FAM71BQ8TC56 605 aa14.42□□□□□ -0.1
PTCH1-226ENST00000553011 PRCCQ92733 491 aaPredicted RBP14.42□□□□□ -0.1
PTCH1-226ENST00000553011 FAM129BQ96TA1 746 aa14.42□□□□□ -0.1
PTCH1-226ENST00000553011 SLC39A8Q9C0K1 460 aa14.42□□□□□ -0.1
PTCH1-226ENST00000553011 SEMA4AQ9H3S1 761 aa14.42□□□□□ -0.1
PTCH1-226ENST00000553011 MBD1Q9UIS9 605 aaPredicted RBP14.42□□□□□ -0.1
PTCH1-226ENST00000553011 CYP8B1Q9UNU6 501 aa14.42□□□□□ -0.1
PTCH1-226ENST00000553011 SMG5Q9UPR3 1016 aaKnown RBP14.42□□□□□ -0.1
PTCH1-226ENST00000553011 ANKRD36A6QL64 1941 aa14.42□□□□□ -0.1
PTCH1-226ENST00000553011 PRR23AA6NEV1 266 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 PJA2O43164 708 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 KDELR3O43731 214 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 SPOPO43791 374 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 BNIP3LO60238 219 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 LMNAP02545 664 aaKnown RBP14.41□□□□□ -0.1
PTCH1-226ENST00000553011 SLC1A1P43005 524 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 NDST2P52849 883 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 SERINC3Q13530 473 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 DPYSL3Q14195 570 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 PARP15Q460N3 678 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 ZFYVE27Q5T4F4 411 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 AFMIDQ63HM1 303 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 ZNF776Q68DI1 518 aaPredicted RBP14.41□□□□□ -0.1
PTCH1-226ENST00000553011 C22orf39Q6P5X5 142 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 ASCL5Q7RTU5 278 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 MMAAQ8IVH4 418 aaKnown RBP14.41□□□□□ -0.1
PTCH1-226ENST00000553011 TP53INP2Q8IXH6 220 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 KCTD6Q8NC69 237 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 TPCN2Q8NHX9 752 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 RAPGEF5Q92565 580 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 CALN1Q9BXU9 219 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 RSPH9Q9H1X1 276 aaPredicted RBP14.41□□□□□ -0.1
PTCH1-226ENST00000553011 TNKS2Q9H2K2 1166 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 FBRSQ9HAH7 460 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 DONSONQ9NYP3 566 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 USP36Q9P275 1121 aaKnown RBP14.41□□□□□ -0.1
PTCH1-226ENST00000553011 TRIM10Q9UDY6 481 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 HPCAL4Q9UM19 191 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 FCF1Q9Y324 198 aaKnown RBP14.41□□□□□ -0.1
PTCH1-226ENST00000553011 ALG6Q9Y672 507 aa14.41□□□□□ -0.1
PTCH1-226ENST00000553011 IGHV1OR15-9A0A0B4J2B8 117 aa14.4□□□□□ -0.1
PTCH1-226ENST00000553011 BTNL10A8MVZ5 291 aa14.4□□□□□ -0.1
PTCH1-226ENST00000553011 C7P10643 843 aa14.4□□□□□ -0.1
PTCH1-226ENST00000553011 PAPOLAP51003 745 aaKnown RBP14.4□□□□□ -0.1
PTCH1-226ENST00000553011 TPMTP51580 245 aa14.4□□□□□ -0.1
PTCH1-226ENST00000553011 CLCN6P51797 869 aa14.4□□□□□ -0.1
PTCH1-226ENST00000553011 SLC20A2Q08357 652 aa14.4□□□□□ -0.1
PTCH1-226ENST00000553011 ELAVL3Q14576 367 aaKnown RBP14.4□□□□□ -0.1
PTCH1-226ENST00000553011 PDK2Q15119 407 aa14.4□□□□□ -0.1
PTCH1-226ENST00000553011 PLK5Q496M5 336 aa14.4□□□□□ -0.1
PTCH1-226ENST00000553011 C11orf63Q6NUN7 778 aa14.4□□□□□ -0.1
PTCH1-226ENST00000553011 TMCO3Q6UWJ1 677 aa14.4□□□□□ -0.1
PTCH1-226ENST00000553011 ARHGAP36Q6ZRI8 547 aa14.4□□□□□ -0.1
PTCH1-226ENST00000553011 METTL3Q86U44 580 aaKnown RBP14.4□□□□□ -0.1
PTCH1-226ENST00000553011 SPACA7Q96KW9 195 aa14.4□□□□□ -0.1
PTCH1-226ENST00000553011 DUSP15Q9H1R2 295 aaPredicted RBP14.4□□□□□ -0.1
PTCH1-226ENST00000553011 ITM2CQ9NQX7 267 aa14.4□□□□□ -0.1
PTCH1-226ENST00000553011 RCOR3Q9P2K3 495 aaPredicted RBP14.4□□□□□ -0.1
PTCH1-226ENST00000553011 RAB23Q9ULC3 237 aa14.4□□□□□ -0.1
PTCH1-226ENST00000553011 LRRD1A4D1F6 860 aa14.39□□□□□ -0.11
PTCH1-226ENST00000553011 ARHGAP42A6NI28 874 aa14.39□□□□□ -0.11
PTCH1-226ENST00000553011 J3KR12 359 aa14.39□□□□□ -0.11
PTCH1-226ENST00000553011 DFFAO00273 331 aa14.39□□□□□ -0.11
PTCH1-226ENST00000553011 MID1O15344 667 aa14.39□□□□□ -0.11
PTCH1-226ENST00000553011 RNASEH1O60930 286 aaKnown RBP14.39□□□□□ -0.11
PTCH1-226ENST00000553011 ZNF217O75362 1048 aa14.39□□□□□ -0.11
PTCH1-226ENST00000553011 ZNF821O75541 412 aaPredicted RBP14.39□□□□□ -0.11
PTCH1-226ENST00000553011 KRT1P04264 644 aa14.39□□□□□ -0.11
PTCH1-226ENST00000553011 ACADMP11310 421 aa14.39□□□□□ -0.11
PTCH1-226ENST00000553011 KDELR1P24390 212 aa14.39□□□□□ -0.11
PTCH1-226ENST00000553011 PSMD8P48556 350 aa14.39□□□□□ -0.11
PTCH1-226ENST00000553011 MRE11P49959 708 aa14.39□□□□□ -0.11
PTCH1-226ENST00000553011 NAP1L1P55209 391 aaKnown RBP14.39□□□□□ -0.11
PTCH1-226ENST00000553011 BYSLQ13895 437 aaKnown RBP14.39□□□□□ -0.11
PTCH1-226ENST00000553011 CST6Q15828 149 aa14.39□□□□□ -0.11
PTCH1-226ENST00000553011 ANKRD20A8PQ5CZ79 823 aa14.39□□□□□ -0.11
PTCH1-226ENST00000553011 LRRC38Q5VT99 294 aa14.39□□□□□ -0.11
PTCH1-226ENST00000553011 FAM124AQ86V42 546 aa14.39□□□□□ -0.11
PTCH1-226ENST00000553011 MAP7D3Q8IWC1 876 aa14.39□□□□□ -0.11
PTCH1-226ENST00000553011 LRRC8AQ8IWT6 810 aa14.39□□□□□ -0.11
PTCH1-226ENST00000553011 RHOT1Q8IXI2 618 aa14.39□□□□□ -0.11
PTCH1-226ENST00000553011 CHST14Q8NCH0 376 aa14.39□□□□□ -0.11
PTCH1-226ENST00000553011 CCDC112Q8NEF3 446 aa14.39□□□□□ -0.11
PTCH1-226ENST00000553011 OR2A12Q8NGT7 310 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms