RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 STYK1Q6J9G0 422 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 RPS27LQ71UM5 84 aaKnown RBP11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 ZNF534Q76KX8 674 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 CELF6Q96J87 481 aaKnown RBP11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 PLEKHG4BQ96PX9 1271 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 RBBP8Q99708 897 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 FAM49AQ9H0Q0 323 aaPredicted RBP11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 ING2Q9H160 280 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 PLAC1Q9HBJ0 212 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 MYOZ2Q9NPC6 264 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 SH3GLB1Q9Y371 365 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 C1orf232A0A0U1RR37 186 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 ZBBXA8MT70 800 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 PDLIM1O00151 329 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 HCRTO43612 131 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 ATG7O95352 703 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 OCM2P0CE71 109 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 OCMP0CE72 109 aaPredicted RBP11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 EEF1DP29692 281 aaKnown RBP11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 ITKQ08881 620 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 MGAT5BQ3V5L5 792 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 LIPMQ5VYY2 423 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 DCAF15Q66K64 600 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 FAM83AQ86UY5 434 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 DHFR2Q86XF0 187 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 SLC7A14Q8TBB6 771 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 RNF139Q8WU17 664 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 KLHL32Q96NJ5 620 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 MRPL45Q9BRJ2 306 aaKnown RBP11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 DEFB129Q9H1M3 183 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 TSPYL2Q9H2G4 693 aaPredicted RBP11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 POLR1BQ9H9Y6 1135 aa11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 MRPL40Q9NQ50 206 aaKnown RBP11.77□□□□□ -0.52
PPFIA2-227ENST00000552948 E7ENX8 843 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 PGK2P07205 417 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 C21orf59P57076 290 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 TRAF2Q12933 501 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 TAZQ16635 292 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 HSDL1Q3SXM5 330 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 XKR5Q6UX68 686 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 TP53INP2Q8IXH6 220 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 OFCC1Q8IZS5 231 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 ZNF567Q8N184 647 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 QKIQ96PU8 341 aaKnown RBP eCLIP11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 OSBPL11Q9BXB4 747 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 DRC3Q9H069 523 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 ADNPQ9H2P0 1102 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 MINDY3Q9H8M7 445 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 CLK4Q9HAZ1 481 aaKnown RBP11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 PTPRHQ9HD43 1115 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 PNPLA3Q9NST1 481 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 HOXC10Q9NYD6 342 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 SELENONQ9NZV5 590 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 HSFX1Q9UBD0 423 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 PSMD12O00232 456 aaPredicted RBP11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 MT-ND1P03886 318 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 PRDX6P30041 224 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 SLC7A2P52569 658 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 LIMK2P53671 638 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 TNFAIP2Q03169 654 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 SLC12A1Q13621 1099 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 FAM83EQ2M2I3 478 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 LCLAT1Q6UWP7 414 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 GADL1Q6ZQY3 521 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 KRT27Q7Z3Y8 459 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 DDIASQ8IXT1 998 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 FCRL3Q96P31 734 aaPredicted RBP11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 NCKIPSDQ9NZQ3 722 aa11.77□□□□□ -0.53
PPFIA2-227ENST00000552948 CNTNAP1P78357 1384 aa11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 NR5A2O00482 541 aa11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 CLOCKO15516 846 aa11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 ZSCAN9O15535 394 aaPredicted RBP11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 SUPT7LO94864 414 aa11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 ITGBL1O95965 494 aaPredicted RBP11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 SLC4A1P02730 911 aa11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 TMED10P49755 219 aaKnown RBP11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 MAPRE2Q15555 327 aa11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 ZNF423Q2M1K9 1284 aa11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 ANO4Q32M45 955 aa11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 FUT11Q495W5 492 aa11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 ATG14Q6ZNE5 492 aa11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 ILDR2Q71H61 639 aa11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 COPS5Q92905 334 aa11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 CCDC138Q96M89 665 aa11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 POMKQ9H5K3 350 aa11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 CROTQ9UKG9 612 aa11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 COPG1Q9Y678 874 aaKnown RBP11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 A0A087WXM4 84 aa11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 TRPC5OSA6NMA1 111 aa11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 TMEM114B3SHH9 223 aa11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 DFFAO00273 331 aa11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 JUNP05412 331 aaKnown RBP11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 STMN1P16949 149 aa11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 LRPAP1P30533 357 aa11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 OTUD3Q5T2D3 398 aaPredicted RBP11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 TTC30AQ86WT1 665 aa11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 FSTL5Q8N475 847 aaPredicted RBP11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 NXNL1Q96CM4 212 aa11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 QTRT2Q9H974 415 aaKnown RBP11.76□□□□□ -0.53
PPFIA2-227ENST00000552948 GBA2Q9HCG7 927 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms