RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 PEX26Q7Z412 305 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 LGI2Q8N0V4 545 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 RNF10Q8N5U6 811 aaKnown RBP11.7□□□□□ -0.54
TMEM116-218ENST00000552839 NIPA2Q8N8Q9 360 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 HJURPQ8NCD3 748 aaPredicted RBP11.7□□□□□ -0.54
TMEM116-218ENST00000552839 BAHD1Q8TBE0 780 aaPredicted RBP11.7□□□□□ -0.54
TMEM116-218ENST00000552839 KIAA1524Q8TCG1 905 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 DDI1Q8WTU0 396 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 CRELD1Q96HD1 420 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 RPRD1AQ96P16 312 aaPredicted RBP11.7□□□□□ -0.54
TMEM116-218ENST00000552839 BBS2Q9BXC9 721 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 LACRTQ9GZZ8 138 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 DHX35Q9H5Z1 703 aaKnown RBP11.7□□□□□ -0.54
TMEM116-218ENST00000552839 GAREM1Q9H706 876 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 TM7SF3Q9NS93 570 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 WSB2Q9NYS7 404 aaPredicted RBP11.7□□□□□ -0.54
TMEM116-218ENST00000552839 STIM2Q9P246 746 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 TRIM10Q9UDY6 481 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 AMFRQ9UKV5 643 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 AGO1Q9UL18 857 aaKnown RBP11.7□□□□□ -0.54
TMEM116-218ENST00000552839 AP4E1Q9UPM8 1137 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 SMG1Q96Q15 3661 aaKnown RBP11.7□□□□□ -0.54
TMEM116-218ENST00000552839 RCCD1A6NED2 376 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 MEI4A8MW99 385 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 GFRA2O00451 464 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 CREB3O43889 395 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 BUB1BO60566 1050 aaPredicted RBP11.69□□□□□ -0.54
TMEM116-218ENST00000552839 TSPAN3O60637 253 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 PAGE1O75459 146 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 DKK1O94907 266 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 KRT1P04264 644 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 CISD3P0C7P0 127 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 ATXN1LP0C7T5 689 aaKnown RBP11.69□□□□□ -0.54
TMEM116-218ENST00000552839 ZNF883P0CG24 379 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 TACR2P21452 398 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 COMTP21964 271 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 ARL4AP40617 200 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 CETN2P41208 172 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 DNA2P51530 1060 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 HADHBP55084 474 aaKnown RBP11.69□□□□□ -0.54
TMEM116-218ENST00000552839 HDAC4P56524 1084 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 TPI1P60174 286 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 BNC1Q01954 994 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 CYP4F3Q08477 520 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 BOLA3Q53S33 107 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 PPP6R3Q5H9R7 873 aaPredicted RBP11.69□□□□□ -0.54
TMEM116-218ENST00000552839 OTUD1Q5VV17 481 aaPredicted RBP11.69□□□□□ -0.54
TMEM116-218ENST00000552839 RWDD4Q6NW29 188 aaKnown RBP11.69□□□□□ -0.54
TMEM116-218ENST00000552839 DBX2Q6ZNG2 339 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 CCDC50Q8IVM0 306 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 MAP7D3Q8IWC1 876 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 RHOT1Q8IXI2 618 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 ZCCHC9Q8N567 271 aaKnown RBP11.69□□□□□ -0.54
TMEM116-218ENST00000552839 CCDC185Q8N715 623 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 UBL4BQ8N7F7 174 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 TRIM58Q8NG06 486 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 TPCN2Q8NHX9 752 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 BHMTQ93088 406 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 NT5C3BQ969T7 300 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 NTAN1Q96AB6 310 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 TOE1Q96GM8 510 aaKnown RBP11.69□□□□□ -0.54
TMEM116-218ENST00000552839 SLC39A13Q96H72 371 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 XPO6Q96QU8 1125 aaKnown RBP11.69□□□□□ -0.54
TMEM116-218ENST00000552839 GPR174Q9BXC1 333 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 MIR1-1HGQ9H1L0 117 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.69□□□□□ -0.54
TMEM116-218ENST00000552839 USP36Q9P275 1121 aaKnown RBP11.69□□□□□ -0.54
TMEM116-218ENST00000552839 FNDC3AQ9Y2H6 1198 aaKnown RBP11.69□□□□□ -0.54
TMEM116-218ENST00000552839 CABIN1Q9Y6J0 2220 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 NUMA1Q14980 2115 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 CKAP5Q14008 2032 aa11.69□□□□□ -0.54
TMEM116-218ENST00000552839 TRABD2BA6NFA1 517 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 H3BRJ5 948 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 EEF2KO00418 725 aaKnown RBP11.68□□□□□ -0.54
TMEM116-218ENST00000552839 PSTPIP1O43586 416 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 SRGAP2O75044 1071 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 PALMO75781 387 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 CER1O95813 267 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 IGLV3-27P01718 113 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 GGCXP38435 758 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 CAMK2BQ13554 666 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 CDH18Q13634 790 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 TCEAL1Q15170 157 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 FUT11Q495W5 492 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 MPPE1Q53F39 396 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 HS1BP3Q53T59 392 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 ADGRF1Q5T601 910 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 ERMARDQ5T6L9 678 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 TTC39BQ5VTQ0 682 aaPredicted RBP11.68□□□□□ -0.54
TMEM116-218ENST00000552839 DCAF12L1Q5VU92 463 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 Q6ZNB5 142 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 METTL3Q86U44 580 aaKnown RBP11.68□□□□□ -0.54
TMEM116-218ENST00000552839 KCTD6Q8NC69 237 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.68□□□□□ -0.54
TMEM116-218ENST00000552839 CENPIQ92674 756 aaPredicted RBP11.68□□□□□ -0.54
TMEM116-218ENST00000552839 AZIN2Q96A70 460 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 TBC1D31Q96DN5 1066 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 HAPLN3Q96S86 360 aa11.68□□□□□ -0.54
TMEM116-218ENST00000552839 SNRNP25Q9BV90 132 aaKnown RBP11.68□□□□□ -0.54
TMEM116-218ENST00000552839 MKRN2Q9H000 416 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms