RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 OR8D1Q8WZ84 308 aa12.17□□□□□ -0.46
CKAP4-202ENST00000552828 DCBLD2Q96PD2 775 aa12.17□□□□□ -0.46
CKAP4-202ENST00000552828 PLCB1Q9NQ66 1216 aa12.17□□□□□ -0.46
CKAP4-202ENST00000552828 TBC1D30Q9Y2I9 924 aa12.17□□□□□ -0.46
CKAP4-202ENST00000552828 PRAMEF26H0Y7S4 382 aa12.16□□□□□ -0.46
CKAP4-202ENST00000552828 UCHL3P15374 230 aa12.16□□□□□ -0.46
CKAP4-202ENST00000552828 GNA15P30679 374 aa12.16□□□□□ -0.46
CKAP4-202ENST00000552828 TAS2R38P59533 333 aa12.16□□□□□ -0.46
CKAP4-202ENST00000552828 SEMG2Q02383 582 aa12.16□□□□□ -0.46
CKAP4-202ENST00000552828 AUHQ13825 339 aaKnown RBP12.16□□□□□ -0.46
CKAP4-202ENST00000552828 STAT4Q14765 748 aa12.16□□□□□ -0.46
CKAP4-202ENST00000552828 DLG2Q15700 870 aa12.16□□□□□ -0.46
CKAP4-202ENST00000552828 SETMARQ53H47 684 aaPredicted RBP12.16□□□□□ -0.46
CKAP4-202ENST00000552828 NEK5Q6P3R8 708 aa12.16□□□□□ -0.46
CKAP4-202ENST00000552828 LRRC69Q6ZNQ3 347 aa12.16□□□□□ -0.46
CKAP4-202ENST00000552828 APTXQ7Z2E3 356 aaKnown RBP12.16□□□□□ -0.46
CKAP4-202ENST00000552828 LUZP1Q86V48 1076 aa12.16□□□□□ -0.46
CKAP4-202ENST00000552828 DEFB106AQ8N104 65 aa12.16□□□□□ -0.46
CKAP4-202ENST00000552828 SLC25A45Q8N413 288 aa12.16□□□□□ -0.46
CKAP4-202ENST00000552828 TMEM145Q8NBT3 493 aa12.16□□□□□ -0.46
CKAP4-202ENST00000552828 OR52K2Q8NGK3 314 aa12.16□□□□□ -0.46
CKAP4-202ENST00000552828 PIP4K2CQ8TBX8 421 aa12.16□□□□□ -0.46
CKAP4-202ENST00000552828 SHC3Q92529 594 aa12.16□□□□□ -0.46
CKAP4-202ENST00000552828 FGF11Q92914 225 aa12.16□□□□□ -0.46
CKAP4-202ENST00000552828 PCMTD1Q96MG8 357 aaPredicted RBP12.16□□□□□ -0.46
CKAP4-202ENST00000552828 FAM204AQ9H8W3 233 aa12.16□□□□□ -0.46
CKAP4-202ENST00000552828 PREBQ9HCU5 417 aa12.16□□□□□ -0.46
CKAP4-202ENST00000552828 ACP6Q9NPH0 428 aa12.16□□□□□ -0.46
CKAP4-202ENST00000552828 DDIT4Q9NX09 232 aa12.16□□□□□ -0.46
CKAP4-202ENST00000552828 HS3ST2Q9Y278 367 aa12.16□□□□□ -0.46
CKAP4-202ENST00000552828 AK5Q9Y6K8 562 aa12.16□□□□□ -0.46
CKAP4-202ENST00000552828 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.15□□□□□ -0.46
CKAP4-202ENST00000552828 C1QTNF3-AMACRE9PGA6 284 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 FOXN3O00409 490 aaPredicted RBP12.15□□□□□ -0.46
CKAP4-202ENST00000552828 TRIM38O00635 465 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 ATXN7O15265 892 aaPredicted RBP12.15□□□□□ -0.46
CKAP4-202ENST00000552828 RRP8O43159 456 aaKnown RBP12.15□□□□□ -0.46
CKAP4-202ENST00000552828 THAP12O43422 761 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 SIGLEC6O43699 453 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 HSF2BPO75031 334 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 CLDN11O75508 207 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 SERPINC1P01008 464 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 MAT2AP31153 395 aaKnown RBP12.15□□□□□ -0.46
CKAP4-202ENST00000552828 E2F1Q01094 437 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 INSM1Q01101 510 aaPredicted RBP12.15□□□□□ -0.46
CKAP4-202ENST00000552828 CENPCQ03188 943 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 PTK2Q05397 1052 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 ZNF177Q13360 481 aaPredicted RBP12.15□□□□□ -0.46
CKAP4-202ENST00000552828 RAPGEF1Q13905 1077 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 DRAP1Q14919 205 aaPredicted RBP12.15□□□□□ -0.46
CKAP4-202ENST00000552828 SYCP1Q15431 976 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 EFHC1Q5JVL4 640 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 PIP5KL1Q5T9C9 394 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 SH2D3CQ8N5H7 860 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 KLHDC7BQ96G42 594 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 RPRD1AQ96P16 312 aaPredicted RBP12.15□□□□□ -0.46
CKAP4-202ENST00000552828 ERGIC2Q96RQ1 377 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 CPXM1Q96SM3 734 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 STK33Q9BYT3 514 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 TSPY26PQ9H489 355 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 FAM207AQ9NSI2 230 aaPredicted RBP12.15□□□□□ -0.46
CKAP4-202ENST00000552828 KLHL11Q9NVR0 708 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 SLC25A13Q9UJS0 675 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 CLCA2Q9UQC9 943 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 DAAM1Q9Y4D1 1078 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 RAI2Q9Y5P3 530 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 FHOD1Q9Y613 1164 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 HS3ST4Q9Y661 456 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 MGAQ8IWI9 3026 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 PTPRQQ9UMZ3 2332 aa12.15□□□□□ -0.46
CKAP4-202ENST00000552828 ARID1BQ8NFD5 2236 aaPredicted RBP12.14□□□□□ -0.47
CKAP4-202ENST00000552828 BRINP1O60477 761 aa12.14□□□□□ -0.47
CKAP4-202ENST00000552828 GLDCP23378 1020 aa12.14□□□□□ -0.47
CKAP4-202ENST00000552828 DGKAP23743 735 aa12.14□□□□□ -0.47
CKAP4-202ENST00000552828 NUMBP49757 651 aa12.14□□□□□ -0.47
CKAP4-202ENST00000552828 KLK7P49862 253 aa12.14□□□□□ -0.47
CKAP4-202ENST00000552828 IRAK1P51617 712 aa12.14□□□□□ -0.47
CKAP4-202ENST00000552828 CDH4P55283 916 aa12.14□□□□□ -0.47
CKAP4-202ENST00000552828 BPIFB4P59827 614 aa12.14□□□□□ -0.47
CKAP4-202ENST00000552828 ACCSLQ4AC99 568 aa12.14□□□□□ -0.47
CKAP4-202ENST00000552828 Q6ZVU0 165 aa12.14□□□□□ -0.47
CKAP4-202ENST00000552828 FAM71AQ8IYT1 594 aa12.14□□□□□ -0.47
CKAP4-202ENST00000552828 TMIEQ8NEW7 156 aa12.14□□□□□ -0.47
CKAP4-202ENST00000552828 NEK11Q8NG66 645 aa12.14□□□□□ -0.47
CKAP4-202ENST00000552828 OR4C6Q8NH72 309 aa12.14□□□□□ -0.47
CKAP4-202ENST00000552828 BAP1Q92560 729 aa12.14□□□□□ -0.47
CKAP4-202ENST00000552828 RNF34Q969K3 372 aa12.14□□□□□ -0.47
CKAP4-202ENST00000552828 PPP1R13BQ96KQ4 1090 aa12.14□□□□□ -0.47
CKAP4-202ENST00000552828 NAA15Q9BXJ9 866 aaKnown RBP12.14□□□□□ -0.47
CKAP4-202ENST00000552828 RTN4Q9NQC3 1192 aaKnown RBP12.14□□□□□ -0.47
CKAP4-202ENST00000552828 VPS28Q9UK41 221 aa12.14□□□□□ -0.47
CKAP4-202ENST00000552828 AJAP1Q9UKB5 411 aaPredicted RBP12.14□□□□□ -0.47
CKAP4-202ENST00000552828 VANGL2Q9ULK5 521 aa12.14□□□□□ -0.47
CKAP4-202ENST00000552828 PCDHGC3Q9UN70 934 aa12.14□□□□□ -0.47
CKAP4-202ENST00000552828 SIK3Q9Y2K2 1263 aa12.14□□□□□ -0.47
CKAP4-202ENST00000552828 ZNF462Q96JM2 2506 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 A0A1B0GTH6 734 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 SDC3O75056 442 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 PAGE1O75459 146 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 C1QL1O75973 258 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms