RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 MT-CO1P00395 513 aa8.71□□□□□ -1.02
CDK4-213ENST00000552713 BRD2P25440 801 aaKnown RBP8.71□□□□□ -1.02
CDK4-213ENST00000552713 ME1P48163 572 aa8.71□□□□□ -1.02
CDK4-213ENST00000552713 PLK1P53350 603 aa8.71□□□□□ -1.02
CDK4-213ENST00000552713 CENPCQ03188 943 aa8.71□□□□□ -1.02
CDK4-213ENST00000552713 ENPEPQ07075 957 aa8.71□□□□□ -1.02
CDK4-213ENST00000552713 LRMPQ12912 555 aa8.71□□□□□ -1.02
CDK4-213ENST00000552713 ZNF177Q13360 481 aaPredicted RBP8.71□□□□□ -1.02
CDK4-213ENST00000552713 FZD2Q14332 565 aa8.71□□□□□ -1.02
CDK4-213ENST00000552713 DLG2Q15700 870 aa8.71□□□□□ -1.02
CDK4-213ENST00000552713 DEFB133Q30KQ1 61 aa8.71□□□□□ -1.02
CDK4-213ENST00000552713 ZCWPW2Q504Y3 356 aa8.71□□□□□ -1.02
CDK4-213ENST00000552713 FAM46CQ5VWP2 391 aa8.71□□□□□ -1.02
CDK4-213ENST00000552713 ABI3BPQ7Z7G0 1075 aa8.71□□□□□ -1.02
CDK4-213ENST00000552713 CLEC14AQ86T13 490 aa8.71□□□□□ -1.02
CDK4-213ENST00000552713 HORMAD1Q86X24 394 aa8.71□□□□□ -1.02
CDK4-213ENST00000552713 CCDC117Q8IWD4 279 aaPredicted RBP8.71□□□□□ -1.02
CDK4-213ENST00000552713 CEP57L1Q8IYX8 460 aa8.71□□□□□ -1.02
CDK4-213ENST00000552713 CCAR2Q8N163 923 aaKnown RBP8.71□□□□□ -1.02
CDK4-213ENST00000552713 ZNF548Q8NEK5 533 aaPredicted RBP8.71□□□□□ -1.02
CDK4-213ENST00000552713 KAT5Q92993 513 aa8.71□□□□□ -1.02
CDK4-213ENST00000552713 BMFQ96LC9 184 aa8.71□□□□□ -1.02
CDK4-213ENST00000552713 CCNL2Q96S94 520 aaPredicted RBP8.71□□□□□ -1.02
CDK4-213ENST00000552713 PRMT1Q99873 361 aaKnown RBP8.71□□□□□ -1.02
CDK4-213ENST00000552713 PREBQ9HCU5 417 aa8.71□□□□□ -1.02
CDK4-213ENST00000552713 GPR27Q9NS67 375 aa8.71□□□□□ -1.02
CDK4-213ENST00000552713 PCDHGA8Q9Y5G5 932 aa8.71□□□□□ -1.02
CDK4-213ENST00000552713 ANKRD36A6QL64 1941 aa8.71□□□□□ -1.02
CDK4-213ENST00000552713 A0A1B0GVL5 298 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 EME2A4GXA9 379 aaPredicted RBP8.7□□□□□ -1.02
CDK4-213ENST00000552713 NEMP2A6NFY4 417 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 C1QTNF3-AMACRE9PGA6 284 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 K7ERQ8 282 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 M0QYV0 167 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 MUSKO15146 869 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 SPINT1O43278 529 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 SUV39H1O43463 412 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 RHOBTB3O94955 611 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 FAM87AP0C7U9 286 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 ALPPL2P10696 532 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 ZNF18P17022 549 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 HNRNPA2B1P22626 353 aaKnown RBP8.7□□□□□ -1.02
CDK4-213ENST00000552713 AKT2P31751 481 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 NNMTP40261 264 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 DUSP3P51452 185 aaPredicted RBP8.7□□□□□ -1.02
CDK4-213ENST00000552713 SULT2A1Q06520 285 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 NNTQ13423 1086 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 ARSIQ5FYB1 569 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 TMEM270Q6UE05 265 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 RBM44Q6ZP01 1051 aaKnown RBP8.7□□□□□ -1.02
CDK4-213ENST00000552713 PTAR1Q7Z6K3 402 aaPredicted RBP8.7□□□□□ -1.02
CDK4-213ENST00000552713 B3GNT8Q7Z7M8 397 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 DSG4Q86SJ6 1040 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 SH2D3CQ8N5H7 860 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 CHST14Q8NCH0 376 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 WDR36Q8NI36 951 aaKnown RBP8.7□□□□□ -1.02
CDK4-213ENST00000552713 FAM149B1Q96BN6 582 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 INTS4Q96HW7 963 aaKnown RBP8.7□□□□□ -1.02
CDK4-213ENST00000552713 SERPINB11Q96P15 392 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 FEM1AQ9BSK4 669 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 TCEAL2Q9H3H9 227 aaPredicted RBP8.7□□□□□ -1.02
CDK4-213ENST00000552713 USP29Q9HBJ7 922 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 ATXN7L1Q9ULK2 861 aaPredicted RBP8.7□□□□□ -1.02
CDK4-213ENST00000552713 PNMA8BQ9ULN7 279 aaPredicted RBP8.7□□□□□ -1.02
CDK4-213ENST00000552713 COQ4Q9Y3A0 265 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 OR51B4Q9Y5P0 310 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 BOD1L1Q8NFC6 3051 aa8.7□□□□□ -1.02
CDK4-213ENST00000552713 SPTY2D1-AS1A0A0U1RR47 76 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 F5H5T6 163 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 KPNA3O00505 521 aaPredicted RBP8.69□□□□□ -1.02
CDK4-213ENST00000552713 ALOX15BO15296 676 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 SMAD6O43541 496 aaKnown RBP8.69□□□□□ -1.02
CDK4-213ENST00000552713 SNAP91O60641 907 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 GCATO75600 419 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 PCDH8O95206 1070 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 TRUB2O95900 331 aaKnown RBP8.69□□□□□ -1.02
CDK4-213ENST00000552713 IGLV3-25P01717 112 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 CSF2P04141 144 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 SRCP12931 536 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 HGFP14210 728 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 NME1P15531 152 aaKnown RBP8.69□□□□□ -1.02
CDK4-213ENST00000552713 PFKFB1P16118 471 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 WT1P19544 449 aaPredicted RBP8.69□□□□□ -1.02
CDK4-213ENST00000552713 RPL13P26373 211 aaKnown RBP8.69□□□□□ -1.02
CDK4-213ENST00000552713 SLC5A2P31639 672 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 CHRNA3P32297 505 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 GGCXP38435 758 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 EIF2B5Q13144 721 aaKnown RBP8.69□□□□□ -1.02
CDK4-213ENST00000552713 EIF4EBP2Q13542 120 aaPredicted RBP8.69□□□□□ -1.02
CDK4-213ENST00000552713 SLC12A1Q13621 1099 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 CNGA2Q16280 664 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 TMEM259Q4ZIN3 620 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 ZCCHC8Q6NZY4 707 aaKnown RBP8.69□□□□□ -1.02
CDK4-213ENST00000552713 FBXL22Q6P050 247 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 ATG14Q6ZNE5 492 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 SLC35F3Q8IY50 421 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 SMYD4Q8IYR2 804 aaPredicted RBP8.69□□□□□ -1.02
CDK4-213ENST00000552713 RBFAQ8N0V3 343 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 ARL14Q8N4G2 192 aa8.69□□□□□ -1.02
CDK4-213ENST00000552713 OR2A12Q8NGT7 310 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms