RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 GSDMBQ8TAX9 411 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 FNIP1Q8TF40 1166 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 ZNF670Q9BS34 389 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 SMOC2Q9H3U7 446 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 NSUN3Q9H649 340 aaKnown RBP8.33□□□□□ -1.08
CHPT1-208ENST00000552215 ZFATQ9P243 1243 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 CA14Q9ULX7 337 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 G3BP2Q9UN86 482 aaKnown RBP8.33□□□□□ -1.08
CHPT1-208ENST00000552215 CHD7Q9P2D1 2997 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 CCDC151A5D8V7 595 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 FAM187AA6NFU0 413 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 TMEM189-UBE2V1I3L0A0 370 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 SERPINF2P08697 491 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 HMGA1P17096 107 aaKnown RBP8.32□□□□□ -1.08
CHPT1-208ENST00000552215 TGM2P21980 687 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 MAGEA11P43364 429 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 ACAP1Q15027 740 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 BRMS1LQ5PSV4 323 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 NAPRTQ6XQN6 538 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 DET1Q7L5Y6 550 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 RASSF3Q86WH2 238 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 MMGT1Q8N4V1 131 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 HJURPQ8NCD3 748 aaPredicted RBP8.32□□□□□ -1.08
CHPT1-208ENST00000552215 BPIFB1Q8TDL5 484 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 IRGQQ8WZA9 623 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 SUSD6Q92537 303 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 ZNF689Q96CS4 500 aaPredicted RBP8.32□□□□□ -1.08
CHPT1-208ENST00000552215 WRAP53Q9BUR4 548 aaKnown RBP8.32□□□□□ -1.08
CHPT1-208ENST00000552215 WDR6Q9NNW5 1121 aaKnown RBP8.32□□□□□ -1.08
CHPT1-208ENST00000552215 CIDEBQ9UHD4 219 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 CRYL1Q9Y2S2 319 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 LOXHD1Q8IVV2 1947 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 H3BNC9 293 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 TNFRSF10BO14763 440 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 OPA1O60313 960 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 CD70P32970 193 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 CTSOP43234 321 aaPredicted RBP8.32□□□□□ -1.08
CHPT1-208ENST00000552215 AAK1Q2M2I8 961 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 SPNS2Q8IVW8 549 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 BBOF1Q8ND07 529 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 CDK5RAP1Q96SZ6 601 aaKnown RBP8.32□□□□□ -1.08
CHPT1-208ENST00000552215 C2orf49Q9BVC5 232 aaPredicted RBP8.32□□□□□ -1.08
CHPT1-208ENST00000552215 IARS2Q9NSE4 1012 aaKnown RBP8.32□□□□□ -1.08
CHPT1-208ENST00000552215 HECAQ9UBI9 543 aaPredicted RBP8.32□□□□□ -1.08
CHPT1-208ENST00000552215 TPRP12270 2363 aaKnown RBP8.32□□□□□ -1.08
CHPT1-208ENST00000552215 ANTXRLA6NF34 631 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 STX7O15400 261 aaKnown RBP8.32□□□□□ -1.08
CHPT1-208ENST00000552215 LZTS3O60299 673 aaPredicted RBP8.32□□□□□ -1.08
CHPT1-208ENST00000552215 PIGNO95427 931 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 PRLRP16471 622 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 ITIH2P19823 946 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 PHBP35232 272 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 CUL1Q13616 776 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 ARHGEF7Q14155 803 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 LRRC38Q5VT99 294 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 C1orf53Q5VUE5 145 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 PRR23CQ6ZRP0 262 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 PPIL6Q8IXY8 311 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 USP13Q92995 863 aaPredicted RBP8.32□□□□□ -1.08
CHPT1-208ENST00000552215 PPP1R36Q96LQ0 422 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 TRMT61BQ9BVS5 477 aaKnown RBP8.32□□□□□ -1.08
CHPT1-208ENST00000552215 BRD8Q9H0E9 1235 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 CDC42EP4Q9H3Q1 356 aaKnown RBP8.32□□□□□ -1.08
CHPT1-208ENST00000552215 PRDM6Q9NQX0 595 aa8.32□□□□□ -1.08
CHPT1-208ENST00000552215 PABPN1LA6NDY0 278 aaKnown RBP8.31□□□□□ -1.08
CHPT1-208ENST00000552215 I6L893 689 aaPredicted RBP8.31□□□□□ -1.08
CHPT1-208ENST00000552215 RB1P06400 928 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 SLC6A11P48066 632 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 GLRBP48167 497 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 DGKGP49619 791 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 MAGOHP61326 146 aaKnown RBP8.31□□□□□ -1.08
CHPT1-208ENST00000552215 ZBTB17Q13105 803 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 EFTUD2Q15029 972 aaKnown RBP eCLIP8.31□□□□□ -1.085e-6■■■□□ 16.3
CHPT1-208ENST00000552215 DLG2Q15700 870 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 SDE2Q6IQ49 451 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 VWCEQ96DN2 955 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 SHCBP1LQ9BZQ2 653 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 WDR87Q6ZQQ6 2873 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 BTNL10A8MVZ5 291 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 SHBGP04278 402 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 ALPIP09923 528 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 GARSP41250 739 aaKnown RBP8.31□□□□□ -1.08
CHPT1-208ENST00000552215 FNTAP49354 379 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 CLCN4P51793 760 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 WNT3AP56704 352 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 NNTQ13423 1086 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 FAM78AQ5JUQ0 283 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 PPP1R15BQ5SWA1 713 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 FBF1Q8TES7 1133 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 C2orf15Q8WU43 125 aaKnown RBP8.31□□□□□ -1.08
CHPT1-208ENST00000552215 STAMBPL1Q96FJ0 436 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 CALR3Q96L12 384 aaKnown RBP8.31□□□□□ -1.08
CHPT1-208ENST00000552215 RIPOR3Q96MK2 946 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 PLCD4Q9BRC7 762 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 MIR1-1HGQ9H1L0 117 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 HAUS2Q9NVX0 235 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 CLIC5Q9NZA1 410 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 VCANP13611 3396 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 CLGNO14967 610 aa8.31□□□□□ -1.08
CHPT1-208ENST00000552215 INPP4BO15327 924 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms