RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 GFRA2O00451 464 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 BET1O15155 118 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 PMM2O15305 246 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 CLDN3O15551 220 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 GAS2O43903 313 aaKnown RBP5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 GPC4O75487 556 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 AKAP3O75969 853 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 KRT75O95678 551 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 SNRPA1P09661 255 aaKnown RBP5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 H2AFB1P0C5Y9 115 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 H2AFB2P0C5Z0 115 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 HSPA1AP0DMV8 641 aaKnown RBP5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 HSPA1BP0DMV9 641 aaKnown RBP5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 BMP3P12645 472 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 IFNA8P32881 189 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 HPCAL1P37235 193 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 GRIK1P39086 918 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 ADCY8P40145 1251 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 STAT3P40763 770 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 GRIA3P42263 894 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 LEPRP48357 1165 aaKnown RBP5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 ARCN1P48444 511 aaKnown RBP5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 TUFMP49411 452 aaKnown RBP5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 CASP5P51878 434 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 ZNF135P52742 658 aaPredicted RBP5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 COPAP53621 1224 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 IST1P53990 364 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 YWHAGP61981 247 aaKnown RBP eCLIP5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 ESRRGP62508 458 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 KDSRQ06136 332 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 BST1Q10588 318 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 PDIA2Q13087 525 aaKnown RBP5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 ITGADQ13349 1161 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 RFTN1Q14699 578 aaPredicted RBP5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 COG2Q14746 738 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 GRM4Q14833 912 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 POU6F1Q14863 301 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 DRAP1Q14919 205 aaPredicted RBP5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 STILQ15468 1287 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 KLHL38Q2WGJ6 581 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 PIGGQ5H8A4 983 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 FAM47CQ5HY64 1035 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 CEP78Q5JTW2 689 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 WIPI1Q5MNZ9 446 aaPredicted RBP5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 PPM1LQ5SGD2 360 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 ATAD3BQ5T9A4 648 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 C9orf131Q5VYM1 1079 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 TRIM72Q6ZMU5 477 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 ARCQ7LC44 396 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 DYMQ7RTS9 669 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 MAVSQ7Z434 540 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 TFAP2DQ7Z6R9 452 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 NT5DC4Q86YG4 428 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 HPS6Q86YV9 775 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 RIOX2Q8IUF8 465 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 ZFPM1Q8IX07 1006 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 LCORLQ8N3X6 602 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 ANKFN1Q8N957 763 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 TOR1AIP2Q8NFQ8 470 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 ABHD11Q8NFV4 315 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 TNIP2Q8NFZ5 429 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 TMEM174Q8WUU8 243 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 C1orf54Q8WWF1 131 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 GATAD2BQ8WXI9 593 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 FKBP10Q96AY3 582 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 FBXL8Q96CD0 374 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 PGBD4Q96DM1 585 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 RMND5BQ96G75 393 aaPredicted RBP5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 C8orf48Q96LL4 319 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 DACH2Q96NX9 599 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 PSKH2Q96QS6 385 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 SORT1Q99523 831 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 NAP1L4Q99733 375 aaKnown RBP5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 HERC2P3Q9BVR0 1158 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 BRIP1Q9BX63 1249 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 GON7Q9BXV9 100 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 SEZ6LQ9BYH1 1024 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 OR2B2Q9GZK3 357 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 RNF38Q9H0F5 515 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 ZNF385DQ9H6B1 395 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 CAAP1Q9H8G2 361 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 SP140LQ9H930 580 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 MARCH7Q9H992 704 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 ARMT1Q9H993 441 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 KANSL2Q9H9L4 492 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 SYTL2Q9HCH5 934 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 PNPLA8Q9NP80 782 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 SAYSD1Q9NPB0 183 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 FBXO8Q9NRD0 319 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 DMAC2Q9NW81 257 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 DNAJC28Q9NX36 388 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 BARHL2Q9NY43 387 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 MOCS1Q9NZB8 636 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 NPAP1Q9NZP6 1156 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 TBC1D14Q9P2M4 693 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 XPO7Q9UIA9 1087 aaKnown RBP5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 ENPP5Q9UJA9 477 aa5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 NOCTQ9UK39 431 aaKnown RBP5.4□□□□□ -1.54
LSM3P2-201ENST00000551246 PSME2Q9UL46 239 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms