RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 TREX2Q9BQ50 279 aaPredicted RBP5.78□□□□□ -1.48
CPSF6-206ENST00000550987 INTS2Q9H0H0 1204 aaKnown RBP5.78□□□□□ -1.48
CPSF6-206ENST00000550987 XYLT2Q9H1B5 865 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 SAP30LQ9HAJ7 183 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 KCNK9Q9NPC2 374 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 HAUS2Q9NVX0 235 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 ASAP1Q9ULH1 1129 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 SH2B3Q9UQQ2 575 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 PLEKHH1Q9ULM0 1364 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 KDM3BQ7LBC6 1761 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 ADGRA2Q96PE1 1338 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 PLXNA3P51805 1871 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 ITPR3Q14573 2671 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 HELZ2Q9BYK8 2649 aaKnown RBP5.77□□□□□ -1.49
CPSF6-206ENST00000550987 DMXL1Q9Y485 3027 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 SH2D7A6NKC9 451 aaPredicted RBP5.77□□□□□ -1.49
CPSF6-206ENST00000550987 ALDOAP04075 364 aaKnown RBP5.77□□□□□ -1.49
CPSF6-206ENST00000550987 C8AP07357 584 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 ACP5P13686 325 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 ARL3P36405 182 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 GPD2P43304 727 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 CCT4P50991 539 aaKnown RBP5.77□□□□□ -1.49
CPSF6-206ENST00000550987 CDH15P55291 814 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 TAS2R50P59544 299 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 TP53BP2Q13625 1128 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 THOC5Q13769 683 aaKnown RBP5.77□□□□□ -1.49
CPSF6-206ENST00000550987 ERV3-1Q14264 604 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 NAA25Q14CX7 972 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 FAM187BQ17R55 369 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 CFAP58Q5T655 872 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 ZNF280DQ6N043 979 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 TMTC3Q6ZXV5 915 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 GPR149Q86SP6 731 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 C1orf210Q8IVY1 113 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 DIS3L2Q8IYB7 885 aaKnown RBP5.77□□□□□ -1.49
CPSF6-206ENST00000550987 NGEFQ8N5V2 710 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 C1orf131Q8NDD1 294 aaKnown RBP5.77□□□□□ -1.49
CPSF6-206ENST00000550987 PRSS33Q8NF86 280 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 ZCCHC10Q8TBK6 192 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 KCNG4Q8TDN1 519 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 CLEC4CQ8WTT0 213 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 SH3KBP1Q96B97 665 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 MYEOVQ96EZ4 313 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 TEPSINQ96N21 525 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 ADAM2Q99965 735 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 AIFM2Q9BRQ8 373 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 FUZQ9BT04 418 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 SSBP3Q9BWW4 388 aaPredicted RBP5.77□□□□□ -1.49
CPSF6-206ENST00000550987 GLIS2Q9BZE0 524 aaPredicted RBP5.77□□□□□ -1.49
CPSF6-206ENST00000550987 MROH8Q9H579 483 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 SYNPO2LQ9H987 977 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 IL21RQ9HBE5 538 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 EIF2B3Q9NR50 452 aaKnown RBP5.77□□□□□ -1.49
CPSF6-206ENST00000550987 ARHGEF3Q9NR81 526 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 GPR34Q9UPC5 381 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 TTLL3Q9Y4R7 772 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 ANKRD36BQ8N2N9 1353 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 USP47Q96K76 1375 aa5.77□□□□□ -1.49
CPSF6-206ENST00000550987 SSC5DA1L4H1 1573 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 ZNF646O15015 1829 aaPredicted RBP5.76□□□□□ -1.49
CPSF6-206ENST00000550987 C3orf70A6NLC5 250 aaPredicted RBP5.76□□□□□ -1.49
CPSF6-206ENST00000550987 TTC34A8MYJ7 566 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 GRM8O00222 908 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 QSOX1O00391 747 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 AP3D1O14617 1153 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 DHX16O60231 1041 aaKnown RBP5.76□□□□□ -1.49
CPSF6-206ENST00000550987 C1RP00736 705 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 ITGB3P05106 788 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 NDUFB7P17568 137 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 CYP2C18P33260 490 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 JAK3P52333 1124 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 CDK18Q07002 472 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 MAMLD1Q13495 774 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 ALKBH1Q13686 389 aaKnown RBP5.76□□□□□ -1.49
CPSF6-206ENST00000550987 NRN1LQ496H8 165 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 SLC9C1Q4G0N8 1177 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 MFSD4BQ5TF39 518 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 FAM205BPQ63HN1 556 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 LNX2Q8N448 690 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 ABHD11Q8NFV4 315 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 GLMPQ8WWB7 406 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 CTHRC1Q96CG8 243 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 MASTLQ96GX5 879 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 HERC2P3Q9BVR0 1158 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 CCDC68Q9H2F9 335 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 R3HDMLQ9H3Y0 253 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 PARD6AQ9NPB6 346 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 RRP7BPQ9NSQ0 103 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 DIAPH3Q9NSV4 1193 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 THAP1Q9NVV9 213 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 PPP1R14DQ9NXH3 145 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 ST6GALNAC2Q9UJ37 374 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 LRRC37A2A6NM11 1700 aa5.76□□□□□ -1.49
CPSF6-206ENST00000550987 TMEM200CA6NKL6 621 aa5.75□□□□□ -1.49
CPSF6-206ENST00000550987 DBX1A6NMT0 343 aa5.75□□□□□ -1.49
CPSF6-206ENST00000550987 DOK2O60496 412 aa5.75□□□□□ -1.49
CPSF6-206ENST00000550987 F9P00740 461 aa5.75□□□□□ -1.49
CPSF6-206ENST00000550987 UBL4AP11441 157 aa5.75□□□□□ -1.49
CPSF6-206ENST00000550987 ENGP17813 658 aa5.75□□□□□ -1.49
CPSF6-206ENST00000550987 MATN1P21941 496 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms