RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 ATG4AQ8WYN0 398 aa12.39□□□□□ -0.43
ERBB3-216ENST00000550869 MAGOHBQ96A72 148 aaKnown RBP12.39□□□□□ -0.43
ERBB3-216ENST00000550869 LMLNQ96KR4 655 aa12.39□□□□□ -0.43
ERBB3-216ENST00000550869 TSGA13Q96PP4 275 aa12.39□□□□□ -0.43
ERBB3-216ENST00000550869 USP29Q9HBJ7 922 aa12.39□□□□□ -0.43
ERBB3-216ENST00000550869 DNPEPQ9ULA0 475 aa12.39□□□□□ -0.43
ERBB3-216ENST00000550869 NEU2Q9Y3R4 380 aa12.39□□□□□ -0.43
ERBB3-216ENST00000550869 ACACBO00763 2458 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.38□□□□□ -0.43
ERBB3-216ENST00000550869 BCLAF3A2AJT9 711 aaKnown RBP12.38□□□□□ -0.43
ERBB3-216ENST00000550869 EFCAB8A8MWE9 144 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 HACD1B0YJ81 288 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 BHMG1C9JSJ3 638 aaPredicted RBP12.38□□□□□ -0.43
ERBB3-216ENST00000550869 SCAMP3O14828 347 aaKnown RBP12.38□□□□□ -0.43
ERBB3-216ENST00000550869 LUC7L3O95232 432 aaKnown RBP12.38□□□□□ -0.43
ERBB3-216ENST00000550869 ITGAVP06756 1048 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 ADRB1P08588 477 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 DRD1P21728 446 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 HOXD9P28356 352 aaPredicted RBP12.38□□□□□ -0.43
ERBB3-216ENST00000550869 PTGIRP43119 386 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 LIMK1P53667 647 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 TUBB4BP68371 445 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 PPIDQ08752 370 aaKnown RBP12.38□□□□□ -0.43
ERBB3-216ENST00000550869 C2orf54Q08AI8 447 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 DMWDQ09019 674 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 BYSLQ13895 437 aaKnown RBP12.38□□□□□ -0.43
ERBB3-216ENST00000550869 EML3Q32P44 896 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 FBXO43Q4G163 708 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 HEATR6Q6AI08 1181 aaKnown RBP12.38□□□□□ -0.43
ERBB3-216ENST00000550869 CXorf57Q6NSI4 855 aaKnown RBP12.38□□□□□ -0.43
ERBB3-216ENST00000550869 RHBDF2Q6PJF5 856 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 ZNF783Q6ZMS7 281 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 TMEM25Q86YD3 366 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 CFAP52Q8N1V2 620 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 CAMKK1Q8N5S9 505 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 FAM160A2Q8N612 972 aaPredicted RBP12.38□□□□□ -0.43
ERBB3-216ENST00000550869 ATL2Q8NHH9 583 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 CCDC26Q8TAB7 109 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 GAB3Q8WWW8 586 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 FATE1Q969F0 183 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 HDAC11Q96DB2 347 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 RUNDC3BQ96NL0 473 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 SLC39A8Q9C0K1 460 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 BRD8Q9H0E9 1235 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 DDX47Q9H0S4 455 aaKnown RBP12.38□□□□□ -0.43
ERBB3-216ENST00000550869 HPS4Q9NQG7 708 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 SPHK2Q9NRA0 654 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 FBXO10Q9UK96 956 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.38□□□□□ -0.43
ERBB3-216ENST00000550869 SPTBN2O15020 2390 aa12.38□□□□□ -0.43
ERBB3-216ENST00000550869 NYNRINQ9P2P1 1898 aaKnown RBP12.38□□□□□ -0.43
ERBB3-216ENST00000550869 ILVBLA1L0T0 632 aa12.37□□□□□ -0.43
ERBB3-216ENST00000550869 DCDC2BA2VCK2 349 aa12.37□□□□□ -0.43
ERBB3-216ENST00000550869 TBL1XO60907 577 aa12.37□□□□□ -0.43
ERBB3-216ENST00000550869 RPP40O75818 363 aaKnown RBP12.37□□□□□ -0.43
ERBB3-216ENST00000550869 RBP3P10745 1247 aa12.37□□□□□ -0.43
ERBB3-216ENST00000550869 MX2P20592 715 aa12.37□□□□□ -0.43
ERBB3-216ENST00000550869 GARSP41250 739 aaKnown RBP12.37□□□□□ -0.43
ERBB3-216ENST00000550869 KCNJ1P48048 391 aa12.37□□□□□ -0.43
ERBB3-216ENST00000550869 EIF3EP60228 445 aaKnown RBP12.37□□□□□ -0.43
ERBB3-216ENST00000550869 PDK1Q15118 436 aa12.37□□□□□ -0.43
ERBB3-216ENST00000550869 PRKD1Q15139 912 aaPredicted RBP12.37□□□□□ -0.43
ERBB3-216ENST00000550869 GLE1Q53GS7 698 aaKnown RBP12.37□□□□□ -0.43
ERBB3-216ENST00000550869 CCDC137Q6PK04 289 aaKnown RBP12.37□□□□□ -0.43
ERBB3-216ENST00000550869 CIR1Q86X95 450 aaPredicted RBP12.37□□□□□ -0.43
ERBB3-216ENST00000550869 CPA6Q8N4T0 437 aa12.37□□□□□ -0.43
ERBB3-216ENST00000550869 OR52K2Q8NGK3 314 aa12.37□□□□□ -0.43
ERBB3-216ENST00000550869 FIBINQ8TAL6 211 aa12.37□□□□□ -0.43
ERBB3-216ENST00000550869 HAUS1Q96CS2 278 aa12.37□□□□□ -0.43
ERBB3-216ENST00000550869 RTP4Q96DX8 246 aa12.37□□□□□ -0.43
ERBB3-216ENST00000550869 ALG14Q96F25 216 aa12.37□□□□□ -0.43
ERBB3-216ENST00000550869 KRT12Q99456 494 aa12.37□□□□□ -0.43
ERBB3-216ENST00000550869 FAM118BQ9BPY3 351 aa12.37□□□□□ -0.43
ERBB3-216ENST00000550869 MAGEH1Q9H213 219 aa12.37□□□□□ -0.43
ERBB3-216ENST00000550869 EBF3Q9H4W6 596 aa12.37□□□□□ -0.43
ERBB3-216ENST00000550869 DUS2Q9NX74 493 aaKnown RBP12.37□□□□□ -0.43
ERBB3-216ENST00000550869 SLC8A2Q9UPR5 921 aa12.37□□□□□ -0.43
ERBB3-216ENST00000550869 HEY1Q9Y5J3 304 aa12.37□□□□□ -0.43
ERBB3-216ENST00000550869 OR51B4Q9Y5P0 310 aa12.37□□□□□ -0.43
ERBB3-216ENST00000550869 WNT6Q9Y6F9 365 aa12.37□□□□□ -0.43
ERBB3-216ENST00000550869 KIAA1549LQ6ZVL6 1849 aa12.37□□□□□ -0.43
ERBB3-216ENST00000550869 TPRP12270 2363 aaKnown RBP12.36□□□□□ -0.43
ERBB3-216ENST00000550869 EML5Q05BV3 1969 aa12.36□□□□□ -0.43
ERBB3-216ENST00000550869 CACNA1BQ00975 2339 aa12.36□□□□□ -0.43
ERBB3-216ENST00000550869 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.36□□□□□ -0.43
ERBB3-216ENST00000550869 MCF2LO15068 1137 aa12.36□□□□□ -0.43
ERBB3-216ENST00000550869 HOXC11O43248 304 aaPredicted RBP12.36□□□□□ -0.43
ERBB3-216ENST00000550869 TSPAN3O60637 253 aa12.36□□□□□ -0.43
ERBB3-216ENST00000550869 OR1E1P30953 314 aa12.36□□□□□ -0.43
ERBB3-216ENST00000550869 STIP1P31948 543 aaKnown RBP12.36□□□□□ -0.43
ERBB3-216ENST00000550869 PLK1P53350 603 aa12.36□□□□□ -0.43
ERBB3-216ENST00000550869 SRSF5Q13243 272 aaKnown RBP12.36□□□□□ -0.43
ERBB3-216ENST00000550869 ZNF177Q13360 481 aaPredicted RBP12.36□□□□□ -0.43
ERBB3-216ENST00000550869 DHX34Q14147 1143 aaKnown RBP12.36□□□□□ -0.43
ERBB3-216ENST00000550869 DHCR24Q15392 516 aa12.36□□□□□ -0.43
ERBB3-216ENST00000550869 GAB4Q2WGN9 574 aa12.36□□□□□ -0.43
ERBB3-216ENST00000550869 PARP15Q460N3 678 aa12.36□□□□□ -0.43
ERBB3-216ENST00000550869 SLC45A4Q5BKX6 768 aa12.36□□□□□ -0.43
ERBB3-216ENST00000550869 PPM1JQ5JR12 505 aa12.36□□□□□ -0.43
ERBB3-216ENST00000550869 LY6G5CQ5SRR4 150 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms