RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 ATL2Q8NHH9 583 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 PLBD2Q8NHP8 589 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 B4GALNT2Q8NHY0 566 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 TBC1D16Q8TBP0 767 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 WDR66Q8TBY9 1149 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 NEK9Q8TD19 979 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 PARD3BQ8TEW8 1205 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 SCFD2Q8WU76 684 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 TEKT4Q8WW24 435 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 NCSTNQ92542 709 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 JADE3Q92613 823 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 INPP5DQ92835 1189 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 P2RX5Q93086 422 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 PHKBQ93100 1093 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 MAGOHBQ96A72 148 aaKnown RBP3.47□□□□□ -1.85
CCNT1-203ENST00000550457 RBM41Q96IZ5 413 aaKnown RBP3.47□□□□□ -1.85
CCNT1-203ENST00000550457 EPSTI1Q96J88 318 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 NR1H4Q96RI1 486 aaPredicted RBP3.47□□□□□ -1.85
CCNT1-203ENST00000550457 KRT12Q99456 494 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 UBAC1Q9BSL1 405 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 FAM126AQ9BYI3 521 aaPredicted RBP3.47□□□□□ -1.85
CCNT1-203ENST00000550457 TXLNGYQ9BZA5 131 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 CCSER1Q9C0I3 900 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 YIPF3Q9GZM5 350 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 LRMDAQ9H2I8 198 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 TAOK3Q9H2K8 898 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 PABPC3Q9H361 631 aaKnown RBP3.47□□□□□ -1.85
CCNT1-203ENST00000550457 RABEP2Q9H5N1 569 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 ECT2Q9H8V3 914 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 ZWILCHQ9H900 591 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 RNPEPL1Q9HAU8 725 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 RIC8AQ9NPQ8 531 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 SH3GLB2Q9NR46 395 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 INTS9Q9NV88 658 aaKnown RBP3.47□□□□□ -1.85
CCNT1-203ENST00000550457 PANK4Q9NVE7 773 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 ADAM22Q9P0K1 906 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 ATXN10Q9UBB4 475 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 FAM153AQ9UHL3 310 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 RASAL2Q9UJF2 1139 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 LRCH1Q9Y2L9 728 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 DAAM1Q9Y4D1 1078 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 IPPQ9Y573 584 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 PCDHB1Q9Y5F3 818 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 KDM3BQ7LBC6 1761 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 FMN2Q9NZ56 1722 aa3.47□□□□□ -1.85
CCNT1-203ENST00000550457 SPATA31A3Q5VYP0 1347 aa3.46□□□□□ -1.85
CCNT1-203ENST00000550457 MROH7Q68CQ1 1323 aa3.46□□□□□ -1.85
CCNT1-203ENST00000550457 PIK3C2AO00443 1686 aa3.46□□□□□ -1.85
CCNT1-203ENST00000550457 PVALEFA0A1B0GWK0 134 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 FRMD3A2A2Y4 597 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 EME2A4GXA9 379 aaPredicted RBP3.46□□□□□ -1.86
CCNT1-203ENST00000550457 DPPA5A6NC42 116 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 MAGEA13PA6NCF6 341 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 BTBD19C9JJ37 291 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 F5H697 171 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 POLRMTO00411 1230 aaKnown RBP3.46□□□□□ -1.86
CCNT1-203ENST00000550457 PODXLO00592 558 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 TRAFD1O14545 582 aaPredicted RBP3.46□□□□□ -1.86
CCNT1-203ENST00000550457 ZNF263O14978 683 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 HTRA2O43464 458 aaPredicted RBP3.46□□□□□ -1.86
CCNT1-203ENST00000550457 RAD51CO43502 376 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 SGTAO43765 313 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 ECE2O60344 883 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 CAND2O75155 1236 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 TCEA3O75764 348 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 PALMO75781 387 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 DCTN3O75935 186 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 UNC5CO95185 931 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 MOCS3O95396 460 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 NTN1O95631 604 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 GGPS1O95749 300 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 UQCRFS1P1P0C7P4 283 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 CCDC166P0CW27 439 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 CPA3P15088 417 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 HOXB6P17509 224 aaKnown RBP3.46□□□□□ -1.86
CCNT1-203ENST00000550457 POU3F3P20264 500 aaPredicted RBP3.46□□□□□ -1.86
CCNT1-203ENST00000550457 C5AR1P21730 350 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 ADD2P35612 726 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 PEX5P50542 639 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 ALDH5A1P51649 535 aaPredicted RBP3.46□□□□□ -1.86
CCNT1-203ENST00000550457 PSMD7P51665 324 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 SLC18A1P54219 525 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 KRTAP10-6P60371 365 aaPredicted RBP3.46□□□□□ -1.86
CCNT1-203ENST00000550457 HAND2P61296 217 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 NCALDP61601 193 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 WTAPQ15007 396 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 TBCCQ15814 346 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 UAP1Q16222 522 aaPredicted RBP3.46□□□□□ -1.86
CCNT1-203ENST00000550457 SLC18A3Q16572 532 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 TNFAIP8L3Q5GJ75 292 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 CEP78Q5JTW2 689 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 THEMIS2Q5TEJ8 643 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 SFMBT2Q5VUG0 894 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 CENPPQ6IPU0 288 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 TAF2Q6P1X5 1199 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 PDXDC1Q6P996 788 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 SLC2A7Q6PXP3 512 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 MFSD6Q6ZSS7 791 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 CYB5R4Q7L1T6 521 aa3.46□□□□□ -1.86
CCNT1-203ENST00000550457 MIGA2Q7L4E1 593 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms